Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25725

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
1,111,261	-				+0.4
1,111,261	-		RR42_RS25715	0.38	-1.6
1,111,330	+		RR42_RS25715	0.68	-0.9
1,111,330	+		RR42_RS25715	0.68	+2.0
1,111,331	-		RR42_RS25715	0.68	-1.0
1,111,331	-		RR42_RS25715	0.68	+1.0
1,111,348	+		RR42_RS25715	0.75	-0.6
1,111,433	-				-0.0
1,111,436	-				-0.2
1,111,506	+				-0.7
1,111,506	+				-0.6
1,111,526	-				+0.0
1,111,526	-				-0.1
1,111,555	-				+0.3
1,111,555	-				+1.6
1,111,555	-				+0.3
1,111,669	+				+1.7
1,111,669	+				-0.3
1,111,669	+				+0.7
1,111,669	+				+0.7
1,111,669	+				+0.4
1,111,823	-		RR42_RS25720	0.32	+0.9
1,111,823	-		RR42_RS25720	0.32	-1.1
1,111,961	-		RR42_RS25720	0.67	-0.4
1,111,961	-		RR42_RS25720	0.67	+0.6
1,111,961	-		RR42_RS25720	0.67	+3.0
1,111,997	-		RR42_RS25720	0.76	-0.8
1,111,997	-		RR42_RS25720	0.76	+1.4
1,112,059	-				+0.6
1,112,225	+		RR42_RS25725	0.17	+0.4
1,112,225	+		RR42_RS25725	0.17	+0.1
1,112,246	+		RR42_RS25725	0.20	+0.5
1,112,247	-		RR42_RS25725	0.20	+1.6
1,112,348	-		RR42_RS25725	0.35	+1.1
1,112,489	+		RR42_RS25725	0.56	+0.0
1,112,490	-		RR42_RS25725	0.57	+0.7
1,112,611	+		RR42_RS25725	0.75	+0.3
1,112,612	-		RR42_RS25725	0.75	-1.4
1,112,823	+				-1.5
1,112,823	+				-0.2
1,113,117	+		RR42_RS25730	0.46	+0.5
1,113,118	-		RR42_RS25730	0.46	-0.4
1,113,118	-		RR42_RS25730	0.46	+0.9
1,113,149	+		RR42_RS25730	0.50	+0.7
1,113,149	+		RR42_RS25730	0.50	+2.2
1,113,149	+		RR42_RS25730	0.50	-1.1
1,113,150	-		RR42_RS25730	0.51	-1.8
1,113,150	-		RR42_RS25730	0.51	-1.9
1,113,582	-				+0.4
1,113,584	+				-0.4
1,113,584	+				-0.1
1,113,585	-				+0.9
1,113,585	-				-0.5