Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25505

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
1,067,209	+		RR42_RS25500	0.48	-0.5
1,067,321	+		RR42_RS25500	0.55	-0.1
1,067,516	+		RR42_RS25500	0.67	+1.9
1,067,517	-		RR42_RS25500	0.67	+0.4
1,067,517	-		RR42_RS25500	0.67	-0.0
1,067,681	+		RR42_RS25500	0.77	-1.3
1,067,692	+		RR42_RS25500	0.78	+0.0
1,067,692	+		RR42_RS25500	0.78	+0.5
1,067,693	-		RR42_RS25500	0.78	+0.5
1,067,764	+		RR42_RS25500	0.83	-0.2
1,067,774	+		RR42_RS25500	0.83	+0.2
1,067,775	-		RR42_RS25500	0.83	-0.5
1,067,879	+		RR42_RS25500	0.90	+1.2
1,067,880	-		RR42_RS25500	0.90	-1.3
1,068,048	+				-1.4
1,068,048	+				+1.1
1,068,174	+				-0.9
1,068,175	-				+1.5
1,068,175	-				-0.1
1,068,175	-				-0.2
1,068,176	+				-2.0
1,068,176	+				-0.6
1,068,177	-				+0.4
1,068,177	-				-0.3
1,068,177	-				+0.2
1,068,177	-				+0.2
1,068,196	+				-1.1
1,068,243	+		RR42_RS25505	0.11	-0.6
1,068,303	+		RR42_RS25505	0.20	+0.6
1,068,303	+		RR42_RS25505	0.20	-1.3
1,068,353	+		RR42_RS25505	0.27	+2.4
1,068,400	+		RR42_RS25505	0.33	+1.1
1,068,414	-		RR42_RS25505	0.35	-0.9
1,068,449	+		RR42_RS25505	0.40	+1.4
1,068,449	+		RR42_RS25505	0.40	+1.3
1,068,450	-		RR42_RS25505	0.40	+0.4
1,068,488	-		RR42_RS25505	0.46	+0.4
1,068,503	+		RR42_RS25505	0.48	-0.0
1,068,503	+		RR42_RS25505	0.48	-0.6
1,068,554	-		RR42_RS25505	0.55	-0.1
1,068,752	+		RR42_RS25505	0.83	-1.7
1,068,752	+		RR42_RS25505	0.83	+0.6
1,068,753	-		RR42_RS25505	0.84	+1.9
1,069,081	-				-0.6
1,069,123	+				+0.1
1,069,395	+		RR42_RS25510	0.42	-1.0
1,069,395	+		RR42_RS25510	0.42	+0.5
1,069,419	+		RR42_RS25510	0.45	+0.0