Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19840

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
4,281,467	+		RR42_RS19835	0.43	-0.2
4,281,467	+		RR42_RS19835	0.43	+0.1
4,281,468	-		RR42_RS19835	0.43	-0.5
4,281,554	+		RR42_RS19835	0.50	-1.3
4,281,554	+		RR42_RS19835	0.50	-1.8
4,281,554	+		RR42_RS19835	0.50	-0.1
4,281,554	+		RR42_RS19835	0.50	+0.2
4,281,554	+		RR42_RS19835	0.50	+0.6
4,281,554	+		RR42_RS19835	0.50	+1.9
4,281,555	-		RR42_RS19835	0.50	-0.7
4,281,689	+		RR42_RS19835	0.60	-0.4
4,281,701	+		RR42_RS19835	0.61	+0.4
4,281,702	-		RR42_RS19835	0.61	-0.8
4,281,702	-		RR42_RS19835	0.61	-0.7
4,281,716	+		RR42_RS19835	0.62	+0.9
4,281,884	+		RR42_RS19835	0.75	+0.1
4,281,884	+		RR42_RS19835	0.75	-0.3
4,282,046	+		RR42_RS19835	0.87	+0.2
4,282,047	-		RR42_RS19835	0.88	+0.1
4,282,047	-		RR42_RS19835	0.88	+0.5
4,282,047	-		RR42_RS19835	0.88	+0.7
4,282,047	-		RR42_RS19835	0.88	+0.1
4,282,139	+				+0.4
4,282,139	+				+1.7
4,282,260	-				+0.3
4,282,260	-				-0.1
4,282,443	+		RR42_RS19840	0.15	-0.4
4,282,794	-		RR42_RS19840	0.44	-0.0
4,283,016	-		RR42_RS19840	0.62	-0.4
4,283,016	-		RR42_RS19840	0.62	+1.8
4,283,340	+		RR42_RS19840	0.89	-0.4
4,283,341	-		RR42_RS19840	0.89	-0.4
4,283,401	-				+1.7
4,283,464	-				+0.9
4,283,476	-				-0.4
4,283,591	+				+0.9
4,283,591	+				+0.8
4,283,591	+				+1.4
4,283,855	+		RR42_RS19845	0.29	-1.2
4,283,856	-		RR42_RS19845	0.29	-0.2
4,283,936	+		RR42_RS19845	0.37	+1.2
4,284,068	-		RR42_RS19845	0.52	-1.4
4,284,068	-		RR42_RS19845	0.52	-1.4
4,284,068	-		RR42_RS19845	0.52	+3.1
4,284,275	+		RR42_RS19845	0.74	-0.7
4,284,276	-		RR42_RS19845	0.74	+2.1
4,284,276	-		RR42_RS19845	0.74	+0.8
4,284,321	-		RR42_RS19845	0.79	+0.2
4,284,321	-		RR42_RS19845	0.79	-2.1
4,284,330	-		RR42_RS19845	0.80	-0.1
4,284,330	-		RR42_RS19845	0.80	-0.5
4,284,350	-		RR42_RS19845	0.82	+2.5