Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17315

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
3,748,927	+		RR42_RS17310	0.42	+1.3
3,748,928	-		RR42_RS17310	0.42	+0.8
3,749,569	+				+2.1
3,749,569	+				+0.4
3,749,569	+				-0.5
3,749,569	+				+0.5
3,749,569	+				+0.4
3,749,570	-				+0.3
3,749,570	-				-0.1
3,749,682	-				-0.7
3,749,760	+				+0.8
3,749,761	-				+2.1
3,749,761	-				-0.5
3,749,761	-				+0.7
3,749,805	+		RR42_RS17315	0.12	-0.7
3,749,805	+		RR42_RS17315	0.12	+1.1
3,749,806	-		RR42_RS17315	0.12	-0.1
3,749,806	-		RR42_RS17315	0.12	-1.5
3,749,953	+		RR42_RS17315	0.24	-0.2
3,749,953	+		RR42_RS17315	0.24	-0.5
3,749,954	-		RR42_RS17315	0.24	+0.4
3,750,335	+		RR42_RS17315	0.54	+1.5
3,750,335	+		RR42_RS17315	0.54	-2.0
3,750,336	-		RR42_RS17315	0.54	+0.8
3,750,336	-		RR42_RS17315	0.54	+0.2
3,750,336	-		RR42_RS17315	0.54	-0.4
3,750,433	-				+2.1
3,750,462	+		RR42_RS17315	0.64	-0.1
3,750,606	+		RR42_RS17315	0.76	-1.9
3,750,606	+		RR42_RS17315	0.76	-1.0
3,750,607	-		RR42_RS17315	0.76	-1.1
3,750,735	+		RR42_RS17315	0.86	-0.4
3,750,736	-		RR42_RS17315	0.86	-0.5
3,750,736	-		RR42_RS17315	0.86	-0.2
3,750,736	-		RR42_RS17315	0.86	-0.6
3,750,763	-		RR42_RS17315	0.88	-1.0
3,750,830	+				+1.0
3,750,913	-				+0.5
3,750,913	-				-0.2
3,750,913	-				+0.1
3,751,136	+		RR42_RS17320	0.15	+0.2
3,751,136	+		RR42_RS17320	0.15	+0.3
3,751,137	-		RR42_RS17320	0.15	+0.7
3,751,492	+				+1.5
3,751,493	-				+0.8
3,751,527	+				+1.3
3,751,540	+		RR42_RS17325	0.11	-0.9
3,751,561	+		RR42_RS17325	0.14	-0.5
3,751,561	+		RR42_RS17325	0.14	-2.4
3,751,562	-		RR42_RS17325	0.14	-0.1
3,751,562	-		RR42_RS17325	0.14	+0.5
3,751,651	+		RR42_RS17325	0.26	+0.3
3,751,660	+		RR42_RS17325	0.27	-0.8
3,751,660	+		RR42_RS17325	0.27	+0.5
3,751,660	+		RR42_RS17325	0.27	-0.2
3,751,661	-		RR42_RS17325	0.28	-0.0
3,751,661	-		RR42_RS17325	0.28	+0.8
3,751,661	-		RR42_RS17325	0.28	+0.9
3,751,661	-		RR42_RS17325	0.28	-0.9
3,751,729	+		RR42_RS17325	0.37	-0.2