Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16910
Experiment: R2A with Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,658,841 | - | RR42_RS16905 | 0.30 | -0.0 | |
3,658,841 | - | RR42_RS16905 | 0.30 | +2.1 | |
3,658,844 | - | RR42_RS16905 | 0.30 | -0.1 | |
3,659,146 | + | RR42_RS16905 | 0.54 | -0.2 | |
3,659,204 | + | RR42_RS16905 | 0.59 | -1.1 | |
3,659,727 | - | -0.1 | |||
3,660,106 | + | RR42_RS16910 | 0.58 | +0.8 | |
3,660,364 | + | -1.2 | |||
3,660,365 | - | +0.1 | |||
3,660,926 | + | RR42_RS16915 | 0.34 | +0.2 | |
3,660,926 | + | RR42_RS16915 | 0.34 | +0.3 | |
3,660,926 | + | RR42_RS16915 | 0.34 | -0.2 | |
3,660,926 | + | RR42_RS16915 | 0.34 | +2.1 | |
3,660,927 | - | RR42_RS16915 | 0.34 | -0.3 | |
3,660,927 | - | RR42_RS16915 | 0.34 | -1.1 | |
3,661,001 | + | RR42_RS16915 | 0.38 | -0.9 | |
3,661,002 | - | RR42_RS16915 | 0.38 | +0.8 | |
3,661,079 | + | RR42_RS16915 | 0.43 | -0.8 | |
3,661,226 | + | RR42_RS16915 | 0.51 | -0.0 |
Or see this region's nucleotide sequence