Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15610

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
3,372,115	+		RR42_RS15605	0.24	-0.3
3,372,214	+		RR42_RS15605	0.32	-1.0
3,372,215	-		RR42_RS15605	0.32	-0.8
3,372,215	-		RR42_RS15605	0.32	-0.2
3,372,280	+		RR42_RS15605	0.37	+0.1
3,372,286	+		RR42_RS15605	0.38	+0.8
3,372,287	-		RR42_RS15605	0.38	+0.3
3,372,523	+		RR42_RS15605	0.57	-0.3
3,372,523	+		RR42_RS15605	0.57	+0.8
3,372,523	+		RR42_RS15605	0.57	+0.2
3,372,524	-		RR42_RS15605	0.57	-0.7
3,372,524	-		RR42_RS15605	0.57	+1.8
3,372,563	-		RR42_RS15605	0.61	+0.2
3,372,637	+		RR42_RS15605	0.67	+0.3
3,372,691	+		RR42_RS15605	0.71	-1.4
3,372,733	+		RR42_RS15605	0.75	+0.2
3,372,734	-		RR42_RS15605	0.75	+0.2
3,372,734	-		RR42_RS15605	0.75	+0.6
3,372,734	-		RR42_RS15605	0.75	-0.9
3,372,795	-		RR42_RS15605	0.80	-0.1
3,372,867	+		RR42_RS15605	0.86	-2.3
3,372,925	+				+1.2
3,372,925	+				-1.1
3,372,926	-				-0.5
3,372,927	+				-2.2
3,372,927	+				-0.1
3,372,928	-				-0.9
3,372,928	-				-1.4
3,372,928	-				+1.0
3,372,965	-				+0.1
3,373,029	+				-2.1
3,373,030	-				+0.2
3,373,190	+		RR42_RS15610	0.25	+0.1
3,373,286	+		RR42_RS15610	0.49	+0.9
3,373,287	-		RR42_RS15610	0.49	-0.4
3,373,287	-		RR42_RS15610	0.49	-0.4
3,373,287	-		RR42_RS15610	0.49	+0.6
3,373,439	+		RR42_RS15610	0.86	-2.0
3,373,792	+				+0.8
3,373,845	+				-0.6
3,373,963	+		RR42_RS15615	0.14	+0.1
3,373,963	+		RR42_RS15615	0.14	-1.3
3,373,963	+		RR42_RS15615	0.14	-0.5
3,373,964	-		RR42_RS15615	0.15	-0.5
3,373,964	-		RR42_RS15615	0.15	-1.1
3,374,129	+		RR42_RS15615	0.32	-0.5
3,374,129	+		RR42_RS15615	0.32	-0.7
3,374,130	-		RR42_RS15615	0.32	-1.4
3,374,130	-		RR42_RS15615	0.32	+0.2
3,374,308	+		RR42_RS15615	0.51	+1.6
3,374,309	-		RR42_RS15615	0.51	+0.0
3,374,309	-		RR42_RS15615	0.51	-0.6
3,374,311	+		RR42_RS15615	0.52	-0.4
3,374,312	-		RR42_RS15615	0.52	+0.5
3,374,312	-		RR42_RS15615	0.52	-0.8
3,374,329	+		RR42_RS15615	0.54	+0.1
3,374,329	+		RR42_RS15615	0.54	+0.1
3,374,330	-		RR42_RS15615	0.54	+2.6
3,374,330	-		RR42_RS15615	0.54	+0.6
3,374,330	-		RR42_RS15615	0.54	+0.2
3,374,447	-		RR42_RS15615	0.66	-0.0