Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14065

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
3,026,166	-		RR42_RS14055	0.90	-0.5
3,026,423	-				-0.6
3,026,594	+				-0.4
3,026,594	+				-1.3
3,026,594	+				+0.7
3,026,594	+				-0.8
3,026,594	+				-0.6
3,026,594	+				-0.4
3,026,594	+				-0.7
3,026,594	+				-0.8
3,026,594	+				+0.2
3,026,595	-				+1.4
3,026,595	-				-0.5
3,026,595	-				+0.8
3,026,595	-				+1.4
3,026,596	+				+0.2
3,026,596	+				+0.5
3,026,596	+				+1.1
3,026,596	+				-1.2
3,026,691	-		RR42_RS14060	0.24	-0.7
3,026,691	-		RR42_RS14060	0.24	-0.8
3,026,691	-		RR42_RS14060	0.24	+0.2
3,026,691	-		RR42_RS14060	0.24	+0.9
3,026,691	-		RR42_RS14060	0.24	+0.0
3,026,867	+		RR42_RS14060	0.88	-0.9
3,026,867	+		RR42_RS14060	0.88	+0.3
3,026,867	+		RR42_RS14060	0.88	+0.8
3,026,868	-		RR42_RS14060	0.89	+0.3
3,026,868	-		RR42_RS14060	0.89	+0.2
3,026,945	+				-1.3
3,026,945	+				-0.5
3,026,946	-				-0.6
3,026,946	-				-0.4
3,026,946	-				+2.9
3,027,221	+		RR42_RS14065	0.21	-0.1
3,027,388	-		RR42_RS14065	0.32	-0.6
3,027,629	+		RR42_RS14065	0.48	-0.2
3,027,630	-		RR42_RS14065	0.48	+1.3
3,027,635	+		RR42_RS14065	0.48	+1.4
3,027,635	+		RR42_RS14065	0.48	-0.3
3,027,635	+		RR42_RS14065	0.48	+0.3
3,027,636	-		RR42_RS14065	0.48	+0.1
3,027,636	-		RR42_RS14065	0.48	-1.9
3,027,636	-		RR42_RS14065	0.48	-0.6
3,027,637	+		RR42_RS14065	0.49	-0.0
3,027,637	+		RR42_RS14065	0.49	+0.5
3,027,637	+		RR42_RS14065	0.49	-1.9
3,027,638	-		RR42_RS14065	0.49	+2.2
3,027,655	+		RR42_RS14065	0.50	-0.6
3,027,655	+		RR42_RS14065	0.50	-0.6
3,027,655	+		RR42_RS14065	0.50	-1.5
3,027,656	-		RR42_RS14065	0.50	+0.1
3,027,656	-		RR42_RS14065	0.50	-0.3
3,027,757	+		RR42_RS14065	0.57	-2.3
3,027,758	-		RR42_RS14065	0.57	-0.8
3,027,758	-		RR42_RS14065	0.57	-1.1
3,027,758	-		RR42_RS14065	0.57	+3.1
3,027,988	+		RR42_RS14065	0.72	-0.7
3,027,988	+		RR42_RS14065	0.72	-0.4
3,027,988	+		RR42_RS14065	0.72	-0.1
3,027,988	+		RR42_RS14065	0.72	-0.3
3,027,988	+		RR42_RS14065	0.72	-1.0
3,027,989	-		RR42_RS14065	0.72	-0.4
3,027,989	-		RR42_RS14065	0.72	-0.5
3,027,989	-		RR42_RS14065	0.72	-1.1
3,027,989	-		RR42_RS14065	0.72	-1.1
3,028,294	+				+0.3
3,028,294	+				-1.3
3,028,517	+				-1.4
3,028,517	+				+3.4
3,028,518	-				-1.0
3,028,544	-				-0.5
3,028,621	+				+0.4
3,028,693	-		RR42_RS14070	0.16	-1.5
3,028,724	+		RR42_RS14070	0.19	+0.1
3,028,864	-		RR42_RS14070	0.32	-0.5
3,028,889	+		RR42_RS14070	0.35	-0.7
3,028,889	+		RR42_RS14070	0.35	+0.7
3,028,889	+		RR42_RS14070	0.35	+0.8
3,028,890	-		RR42_RS14070	0.35	+0.1
3,028,890	-		RR42_RS14070	0.35	+1.1
3,028,890	-		RR42_RS14070	0.35	-1.8
3,029,143	-		RR42_RS14070	0.58	-0.3
3,029,147	+		RR42_RS14070	0.59	-2.5
3,029,147	+		RR42_RS14070	0.59	+0.1
3,029,147	+		RR42_RS14070	0.59	-0.2
3,029,147	+		RR42_RS14070	0.59	-1.2
3,029,147	+		RR42_RS14070	0.59	-1.3
3,029,147	+		RR42_RS14070	0.59	-0.6
3,029,147	+		RR42_RS14070	0.59	-1.6
3,029,148	-		RR42_RS14070	0.59	-0.0
3,029,148	-		RR42_RS14070	0.59	-0.9
3,029,148	-		RR42_RS14070	0.59	-1.3
3,029,148	-		RR42_RS14070	0.59	-2.0
3,029,148	-		RR42_RS14070	0.59	-0.8
3,029,148	-		RR42_RS14070	0.59	-1.2
3,029,315	+		RR42_RS14070	0.74	-1.3
3,029,315	+		RR42_RS14070	0.74	-0.2
3,029,316	-		RR42_RS14070	0.74	-1.6
3,029,339	+		RR42_RS14070	0.77	-1.1
3,029,339	+		RR42_RS14070	0.77	-1.7
3,029,340	-		RR42_RS14070	0.77	+0.3
3,029,350	-		RR42_RS14070	0.78	+0.7
3,029,382	-				+2.1
3,029,382	-		RR42_RS14070	0.81	+1.2
3,029,399	+		RR42_RS14070	0.82	-0.7
3,029,400	-		RR42_RS14070	0.82	+0.7