Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12145

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
2,606,205	+		RR42_RS12140	0.48	-1.4
2,606,210	-		RR42_RS12140	0.49	+0.4
2,606,210	-		RR42_RS12140	0.49	+2.0
2,606,298	+		RR42_RS12140	0.57	+0.5
2,606,299	-		RR42_RS12140	0.57	+1.4
2,606,385	+		RR42_RS12140	0.65	-1.9
2,606,386	-		RR42_RS12140	0.65	+0.1
2,606,386	-		RR42_RS12140	0.65	-0.6
2,606,394	+		RR42_RS12140	0.66	-1.8
2,606,395	-		RR42_RS12140	0.66	+0.6
2,606,395	-		RR42_RS12140	0.66	+0.2
2,606,440	-		RR42_RS12140	0.71	+0.2
2,606,440	-		RR42_RS12140	0.71	+0.6
2,606,707	+				-0.1
2,606,707	+				-0.6
2,606,843	+				-1.0
2,606,844	-				-0.2
2,606,930	+				+0.4
2,606,930	+				+2.5
2,606,930	+				-0.3
2,606,930	+				-0.0
2,606,930	+				+0.0
2,606,931	-				-1.2
2,606,939	-				-0.2
2,606,939	-				-0.3
2,606,939	-				+0.9
2,607,054	-				-0.1
2,607,105	+				-1.0
2,607,139	+				-1.2
2,607,139	+				-0.3
2,607,140	-				-0.0
2,607,247	+				+1.6
2,607,247	+				+0.9
2,607,247	+				+0.8
2,607,247	+				-0.1
2,607,248	-				+0.2
2,607,259	+				-1.2
2,607,346	+				+2.0
2,607,346	+				+2.4
2,607,347	-				+0.3
2,607,347	-				-0.3
2,607,347	-				+0.8
2,607,583	+		RR42_RS12145	0.15	+0.0
2,607,665	-		RR42_RS12145	0.17	+0.0
2,608,021	+		RR42_RS12145	0.29	+1.8
2,608,021	+		RR42_RS12145	0.29	+0.2
2,608,055	-		RR42_RS12145	0.30	-2.5
2,608,096	+		RR42_RS12145	0.31	-0.5
2,608,097	-		RR42_RS12145	0.32	-0.4
2,608,097	-		RR42_RS12145	0.32	-0.2
2,608,097	-		RR42_RS12145	0.32	+1.7
2,608,097	-		RR42_RS12145	0.32	+1.2
2,608,097	-		RR42_RS12145	0.32	-0.6
2,608,331	+		RR42_RS12145	0.39	+0.4
2,608,331	+		RR42_RS12145	0.39	-1.1
2,608,332	-		RR42_RS12145	0.39	-0.6
2,608,332	-		RR42_RS12145	0.39	+1.1
2,608,332	-		RR42_RS12145	0.39	+0.4
2,608,348	+		RR42_RS12145	0.40	+0.7
2,608,349	-		RR42_RS12145	0.40	-1.3
2,608,349	-		RR42_RS12145	0.40	+0.5
2,608,352	+		RR42_RS12145	0.40	+0.0
2,608,352	+		RR42_RS12145	0.40	-0.3
2,608,353	-		RR42_RS12145	0.40	+0.6
2,608,353	-		RR42_RS12145	0.40	-1.0
2,608,556	+		RR42_RS12145	0.47	-0.7
2,608,557	-		RR42_RS12145	0.47	+0.1
2,608,582	+		RR42_RS12145	0.47	-2.4
2,608,583	-		RR42_RS12145	0.48	+0.4
2,608,583	-		RR42_RS12145	0.48	+0.6
2,608,583	-		RR42_RS12145	0.48	+0.0
2,608,663	+		RR42_RS12145	0.50	-0.1
2,608,666	+		RR42_RS12145	0.50	+1.2
2,608,807	+		RR42_RS12145	0.55	+0.4
2,608,807	+		RR42_RS12145	0.55	-0.7
2,608,807	+		RR42_RS12145	0.55	+3.3
2,608,807	+		RR42_RS12145	0.55	+1.1
2,608,807	+		RR42_RS12145	0.55	+0.0
2,608,808	-		RR42_RS12145	0.55	+0.0
2,608,808	-		RR42_RS12145	0.55	-0.4
2,608,808	-		RR42_RS12145	0.55	-1.2
2,608,808	-		RR42_RS12145	0.55	+0.6
2,609,034	-		RR42_RS12145	0.62	+0.0
2,609,351	+		RR42_RS12145	0.73	+0.6
2,609,668	+		RR42_RS12145	0.83	-1.4
2,609,836	-		RR42_RS12145	0.89	+0.3
2,609,836	-		RR42_RS12145	0.89	-0.3
2,610,166	+				-1.2
2,610,166	+				-1.0
2,610,166	+				+1.0
2,610,167	-				+0.6
2,610,167	-				+0.5
2,610,170	+				-0.2
2,610,171	-				-1.5
2,610,171	-				-0.3
2,610,266	+				-0.9
2,610,568	+		RR42_RS12150	0.19	-1.2
2,610,647	+		RR42_RS12150	0.23	-0.7
2,610,647	+		RR42_RS12150	0.23	-0.1
2,610,785	+		RR42_RS12150	0.32	-0.8
2,610,785	+		RR42_RS12150	0.32	-0.3
2,611,046	+		RR42_RS12150	0.48	-1.0
2,611,053	+		RR42_RS12150	0.48	+0.3
2,611,054	-		RR42_RS12150	0.48	+0.3