Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11935
Experiment: R2A with Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,557,423 | + | RR42_RS11930 | 0.32 | -0.1 | |
2,557,669 | + | RR42_RS11930 | 0.52 | -1.0 | |
2,557,669 | + | RR42_RS11930 | 0.52 | +0.2 | |
2,557,853 | + | RR42_RS11930 | 0.67 | -0.9 | |
2,557,853 | + | RR42_RS11930 | 0.67 | -0.1 | |
2,557,860 | + | RR42_RS11930 | 0.68 | -0.6 | |
2,557,860 | + | RR42_RS11930 | 0.68 | -0.4 | |
2,557,860 | + | RR42_RS11930 | 0.68 | -0.9 | |
2,557,864 | + | RR42_RS11930 | 0.68 | -0.3 | |
2,557,864 | + | RR42_RS11930 | 0.68 | -0.4 | |
2,557,864 | + | RR42_RS11930 | 0.68 | -0.6 | |
2,558,307 | + | -1.4 | |||
2,558,317 | + | +0.2 | |||
2,558,317 | + | -1.0 | |||
2,559,769 | + | -1.2 | |||
2,559,791 | + | +0.0 | |||
2,559,792 | - | -2.3 |
Or see this region's nucleotide sequence