Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11695

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
2,503,271	+		RR42_RS11690	0.54	+0.6
2,503,271	+		RR42_RS11690	0.54	+1.5
2,503,271	+		RR42_RS11690	0.54	+0.8
2,503,272	-		RR42_RS11690	0.55	+0.6
2,503,389	+		RR42_RS11690	0.63	+1.2
2,503,390	-		RR42_RS11690	0.63	+1.0
2,503,644	-		RR42_RS11690	0.83	+0.1
2,503,692	+		RR42_RS11690	0.86	-1.0
2,503,692	+		RR42_RS11690	0.86	-0.1
2,503,693	-		RR42_RS11690	0.86	+0.1
2,503,693	-		RR42_RS11690	0.86	-1.6
2,503,715	+		RR42_RS11690	0.88	-1.7
2,503,716	-		RR42_RS11690	0.88	-0.0
2,503,716	-		RR42_RS11690	0.88	+0.0
2,503,716	-		RR42_RS11690	0.88	+1.4
2,503,746	-				-0.0
2,503,863	+				-0.2
2,503,914	+				+0.6
2,503,914	+				+0.0
2,503,915	-				+0.4
2,503,915	-				+0.5
2,504,090	+				-0.3
2,504,090	+				+0.6
2,504,090	+				+1.0
2,504,091	-				+0.1
2,504,187	+				+0.5
2,504,264	+		RR42_RS11695	0.15	-0.3
2,504,264	+		RR42_RS11695	0.15	-0.8
2,504,265	-		RR42_RS11695	0.16	+1.2
2,504,312	+		RR42_RS11695	0.23	-0.2
2,504,313	-		RR42_RS11695	0.23	-0.6
2,504,445	+		RR42_RS11695	0.43	+1.1
2,504,446	-		RR42_RS11695	0.43	-1.7
2,504,446	-		RR42_RS11695	0.43	+0.4
2,504,446	-		RR42_RS11695	0.43	+1.2
2,504,446	-		RR42_RS11695	0.43	+2.4
2,504,469	+		RR42_RS11695	0.47	-1.7
2,504,476	-		RR42_RS11695	0.48	+0.5
2,504,499	-		RR42_RS11695	0.51	-1.2
2,504,670	+		RR42_RS11695	0.77	-1.6
2,504,671	-		RR42_RS11695	0.77	+1.0
2,504,674	+		RR42_RS11695	0.78	+0.5
2,504,674	+		RR42_RS11695	0.78	-0.4
2,504,674	+		RR42_RS11695	0.78	+0.4
2,504,674	+		RR42_RS11695	0.78	+0.1
2,504,675	-		RR42_RS11695	0.78	-1.1
2,504,675	-		RR42_RS11695	0.78	+0.0
2,504,675	-		RR42_RS11695	0.78	-1.4
2,504,818	-				-1.0
2,504,930	+				-0.2
2,504,931	-				+0.6
2,505,044	-		RR42_RS11700	0.18	+0.1
2,505,044	-		RR42_RS11700	0.18	+2.0
2,505,172	+		RR42_RS11700	0.37	-1.4
2,505,172	+		RR42_RS11700	0.37	+1.0
2,505,172	+		RR42_RS11700	0.37	-0.9
2,505,173	-		RR42_RS11700	0.38	-1.1
2,505,173	-		RR42_RS11700	0.38	+0.7
2,505,173	-		RR42_RS11700	0.38	+0.5
2,505,175	+		RR42_RS11700	0.38	-0.0
2,505,175	+		RR42_RS11700	0.38	-0.6
2,505,266	+		RR42_RS11700	0.52	+0.4
2,505,266	+		RR42_RS11700	0.52	-1.0
2,505,267	-		RR42_RS11700	0.52	+0.4
2,505,267	-		RR42_RS11700	0.52	-0.6
2,505,267	-		RR42_RS11700	0.52	+0.9
2,505,277	+		RR42_RS11700	0.54	+0.5
2,505,277	+		RR42_RS11700	0.54	+0.7
2,505,278	-		RR42_RS11700	0.54	-1.2
2,505,696	+		RR42_RS11705	0.17	-0.6
2,505,774	+		RR42_RS11705	0.39	+1.0
2,505,774	+		RR42_RS11705	0.39	+1.0
2,505,774	+		RR42_RS11705	0.39	+0.3
2,505,774	+		RR42_RS11705	0.39	-1.6
2,505,775	-		RR42_RS11705	0.39	+0.3
2,505,775	-		RR42_RS11705	0.39	-1.4