Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10870

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
2,325,739	-		RR42_RS10865	0.32	-0.4
2,325,739	-		RR42_RS10865	0.32	-2.1
2,325,763	+		RR42_RS10865	0.35	+1.3
2,325,909	+		RR42_RS10865	0.50	-0.5
2,326,188	+		RR42_RS10865	0.79	+0.0
2,326,188	+		RR42_RS10865	0.79	-0.5
2,326,189	-		RR42_RS10865	0.80	-2.8
2,326,189	-		RR42_RS10865	0.80	-2.0
2,326,189	-		RR42_RS10865	0.80	-0.5
2,326,189	-		RR42_RS10865	0.80	-0.5
2,326,189	-		RR42_RS10865	0.80	-0.4
2,326,189	-		RR42_RS10865	0.80	+0.9
2,326,192	-		RR42_RS10865	0.80	-2.1
2,326,417	+				-0.8
2,326,417	+				+0.7
2,326,450	+				-1.2
2,326,451	-				-0.8
2,326,493	+				-0.2
2,326,494	-				+0.9
2,326,562	+				+0.1
2,326,563	-				-1.1
2,326,563	-				-0.5
2,326,563	-				+0.1
2,326,819	+		RR42_RS10870	0.47	+1.9
2,326,820	-		RR42_RS10870	0.47	-0.6
2,326,820	-		RR42_RS10870	0.47	-0.6
2,326,820	-		RR42_RS10870	0.47	-0.5
2,326,820	-		RR42_RS10870	0.47	-0.8
2,327,044	+		RR42_RS10870	0.85	+0.3
2,327,045	-		RR42_RS10870	0.85	-0.7
2,327,045	-		RR42_RS10870	0.85	+0.5
2,327,045	-		RR42_RS10870	0.85	+0.5
2,327,283	+				-0.4
2,327,283	+				+1.4
2,327,306	+				+2.2
2,327,306	+				-0.2
2,327,306	+				-0.4
2,327,307	-				+1.2
2,327,307	-				-0.5
2,327,307	-				-0.5
2,327,307	-				+0.7
2,327,307	-				+0.2
2,327,457	+				-0.7
2,327,457	+				+0.6
2,327,457	+				+0.3
2,327,457	+				+0.3
2,327,458	-				-0.5
2,327,654	+		RR42_RS10875	0.14	+0.7
2,327,730	+		RR42_RS10875	0.20	+0.3
2,327,730	+		RR42_RS10875	0.20	-0.3
2,327,746	-		RR42_RS10875	0.21	+0.2
2,327,748	+		RR42_RS10875	0.21	+0.3
2,327,749	-		RR42_RS10875	0.21	-0.2
2,327,749	-		RR42_RS10875	0.21	-1.3