Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09780

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
2,082,611	+				+0.6
2,082,611	+				-0.0
2,082,612	-				-0.5
2,082,690	-				+2.0
2,082,851	+		RR42_RS09775	0.21	-1.8
2,082,851	+		RR42_RS09775	0.21	-0.6
2,082,851	+		RR42_RS09775	0.21	-1.1
2,082,851	+		RR42_RS09775	0.21	-0.7
2,082,851	+		RR42_RS09775	0.21	-2.1
2,082,851	+		RR42_RS09775	0.21	+0.3
2,082,851	+		RR42_RS09775	0.21	-0.3
2,082,852	-		RR42_RS09775	0.21	-0.1
2,082,852	-		RR42_RS09775	0.21	-1.4
2,082,852	-		RR42_RS09775	0.21	+0.4
2,082,852	-		RR42_RS09775	0.21	-1.6
2,082,852	-		RR42_RS09775	0.21	-0.3
2,082,852	-		RR42_RS09775	0.21	+0.3
2,082,852	-		RR42_RS09775	0.21	-0.7
2,082,902	+		RR42_RS09775	0.33	-0.2
2,082,903	-		RR42_RS09775	0.33	-1.4
2,082,952	-		RR42_RS09775	0.44	-0.0
2,082,952	-		RR42_RS09775	0.44	+0.0
2,083,137	+		RR42_RS09775	0.88	-1.9
2,083,138	-		RR42_RS09775	0.88	+1.0
2,083,308	-				-0.7
2,083,308	-				-2.3
2,083,308	-				-0.0
2,083,308	-				+0.3
2,083,674	+		RR42_RS09780	0.45	-1.0
2,083,675	-		RR42_RS09780	0.45	-0.7
2,083,675	-		RR42_RS09780	0.45	-1.1
2,083,873	+				-1.7
2,083,874	-				+2.0
2,083,874	-				+0.2
2,083,882	+				+1.1
2,083,969	+				-0.0
2,084,098	+		RR42_RS09785	0.13	+0.2
2,084,098	+		RR42_RS09785	0.13	+0.4
2,084,173	+		RR42_RS09785	0.20	+0.3
2,084,173	+		RR42_RS09785	0.20	-1.0
2,084,174	-		RR42_RS09785	0.20	-1.4
2,084,227	+		RR42_RS09785	0.25	-0.9
2,084,227	+		RR42_RS09785	0.25	+0.9
2,084,266	+		RR42_RS09785	0.28	-0.1
2,084,266	+		RR42_RS09785	0.28	+0.3
2,084,346	+		RR42_RS09785	0.35	+0.7
2,084,347	-		RR42_RS09785	0.35	+0.5
2,084,350	+		RR42_RS09785	0.36	-2.0
2,084,351	-		RR42_RS09785	0.36	+1.4
2,084,351	-		RR42_RS09785	0.36	+0.4
2,084,534	-		RR42_RS09785	0.52	+1.0
2,084,554	-		RR42_RS09785	0.54	+0.0
2,084,554	-		RR42_RS09785	0.54	-1.2
2,084,554	-		RR42_RS09785	0.54	-2.4
2,084,563	+		RR42_RS09785	0.54	-0.6
2,084,564	-		RR42_RS09785	0.54	-0.4
2,084,564	-		RR42_RS09785	0.54	-0.4
2,084,633	-		RR42_RS09785	0.61	-0.4
2,084,681	-		RR42_RS09785	0.65	-2.0
2,084,686	+		RR42_RS09785	0.65	+1.6
2,084,709	+		RR42_RS09785	0.67	-0.9
2,084,709	+		RR42_RS09785	0.67	-0.0
2,084,771	-		RR42_RS09785	0.73	-0.9
2,084,771	-		RR42_RS09785	0.73	+0.6
2,084,779	-		RR42_RS09785	0.73	-0.7