Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08985

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
1,885,453	+				-0.1
1,885,454	-				+0.8
1,885,619	+				-0.8
1,885,763	+				+0.1
1,885,763	+				+0.2
1,885,872	+				+0.4
1,886,009	+		RR42_RS08980	0.37	+0.2
1,886,026	-		RR42_RS08980	0.45	+0.6
1,886,038	+		RR42_RS08980	0.50	-2.2
1,886,038	+		RR42_RS08980	0.50	-2.3
1,886,078	+		RR42_RS08980	0.69	-0.5
1,886,078	+		RR42_RS08980	0.69	-0.9
1,886,139	-				-0.1
1,886,166	-				-0.2
1,886,280	+				-1.6
1,886,281	-				-0.3
1,886,293	-				-1.3
1,886,489	+				+0.6
1,886,597	+		RR42_RS08985	0.11	-0.3
1,886,597	+		RR42_RS08985	0.11	-0.4
1,886,960	-		RR42_RS08985	0.33	-1.5
1,886,960	-		RR42_RS08985	0.33	-0.4
1,886,972	+		RR42_RS08985	0.34	-1.1
1,886,972	+		RR42_RS08985	0.34	-0.1
1,887,054	+		RR42_RS08985	0.39	-1.2
1,887,055	-		RR42_RS08985	0.39	-0.1
1,887,186	+		RR42_RS08985	0.47	+0.5
1,887,187	-		RR42_RS08985	0.47	+0.3
1,887,213	+		RR42_RS08985	0.49	+0.0
1,887,214	-		RR42_RS08985	0.49	+1.4
1,887,258	-		RR42_RS08985	0.52	+0.1
1,887,424	+		RR42_RS08985	0.62	-2.9
1,887,424	+		RR42_RS08985	0.62	-0.6
1,887,425	-		RR42_RS08985	0.62	-0.9
1,887,425	-		RR42_RS08985	0.62	+0.1
1,887,425	-		RR42_RS08985	0.62	+0.6
1,887,426	+		RR42_RS08985	0.62	+1.2
1,887,426	+		RR42_RS08985	0.62	+1.5
1,887,497	+		RR42_RS08985	0.66	-0.3
1,887,497	+		RR42_RS08985	0.66	-1.1
1,887,497	+		RR42_RS08985	0.66	+0.1
1,887,497	+		RR42_RS08985	0.66	+0.0
1,887,497	+		RR42_RS08985	0.66	-0.1
1,887,497	+		RR42_RS08985	0.66	-1.6
1,887,498	-		RR42_RS08985	0.66	+0.7
1,887,498	-		RR42_RS08985	0.66	+0.8
1,887,498	-		RR42_RS08985	0.66	+0.5
1,887,498	-		RR42_RS08985	0.66	-2.0
1,887,498	-		RR42_RS08985	0.66	-0.7
1,887,514	-		RR42_RS08985	0.67	-1.3
1,887,543	+		RR42_RS08985	0.69	-0.6
1,887,543	+		RR42_RS08985	0.69	-1.0
1,887,543	+		RR42_RS08985	0.69	+0.1
1,887,543	+		RR42_RS08985	0.69	-1.0
1,887,543	+		RR42_RS08985	0.69	-1.0
1,887,543	+		RR42_RS08985	0.69	+0.1
1,887,543	+		RR42_RS08985	0.69	-0.7
1,887,543	+		RR42_RS08985	0.69	-0.3
1,887,543	+		RR42_RS08985	0.69	-1.5
1,887,544	-		RR42_RS08985	0.69	-1.4
1,887,544	-		RR42_RS08985	0.69	-0.3
1,887,544	-		RR42_RS08985	0.69	+0.9
1,887,544	-		RR42_RS08985	0.69	+1.8
1,887,544	-		RR42_RS08985	0.69	+0.5
1,887,547	+		RR42_RS08985	0.69	-0.1
1,887,547	+		RR42_RS08985	0.69	-0.8
1,887,548	-		RR42_RS08985	0.69	+0.6
1,887,548	-		RR42_RS08985	0.69	-0.4
1,887,548	-		RR42_RS08985	0.69	-0.0
1,887,548	-		RR42_RS08985	0.69	-0.4
1,887,548	-		RR42_RS08985	0.69	+1.5
1,887,548	-		RR42_RS08985	0.69	-0.2
1,887,612	+		RR42_RS08985	0.73	+1.5
1,887,613	-		RR42_RS08985	0.73	+1.7
1,887,613	-		RR42_RS08985	0.73	+1.3
1,887,613	-		RR42_RS08985	0.73	-0.1
1,887,961	+				-0.1
1,887,961	+				-0.7
1,887,961	+				-0.1
1,887,961	+				-1.6
1,887,962	-				+0.5
1,887,962	-				+0.4
1,888,031	+				-0.3
1,888,031	+				-0.7
1,888,049	+				-1.5
1,888,057	+				+0.5
1,888,057	+				+0.5
1,888,057	+				+0.2
1,888,057	+				+0.1
1,888,058	-				-0.5
1,888,058	-				-2.2
1,888,058	-				+0.8
1,888,082	-				+3.1
1,888,096	+				-0.6
1,888,183	-				+1.5
1,888,201	-				-1.6
1,888,201	-				+1.0
1,888,203	+				-0.4
1,888,203	+				-0.5
1,888,203	+				-0.1
1,888,203	+				+1.5
1,888,204	-				-1.3
1,888,204	-				-2.3
1,888,204	-				-0.5
1,888,235	+				+0.5
1,888,454	+		RR42_RS08990	0.19	+1.3
1,888,487	+		RR42_RS08990	0.22	+0.1
1,888,487	+		RR42_RS08990	0.22	-1.1
1,888,679	+		RR42_RS08990	0.38	-1.1
1,888,798	-		RR42_RS08990	0.48	-0.1
1,888,798	-		RR42_RS08990	0.48	-0.9
1,888,798	-		RR42_RS08990	0.48	-0.8
1,889,009	+		RR42_RS08990	0.67	-0.1
1,889,010	-		RR42_RS08990	0.67	-1.2