Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08695

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
1,820,667	+		RR42_RS08685	0.12	-1.7
1,820,667	+		RR42_RS08685	0.12	-2.2
1,820,667	+		RR42_RS08685	0.12	+0.4
1,820,806	+		RR42_RS08685	0.39	+1.5
1,820,807	-		RR42_RS08685	0.39	-0.2
1,820,819	+		RR42_RS08685	0.41	-1.3
1,820,819	+		RR42_RS08685	0.41	-0.2
1,820,859	+		RR42_RS08685	0.49	-1.8
1,820,860	-		RR42_RS08685	0.49	+1.0
1,820,860	-		RR42_RS08685	0.49	-0.6
1,820,877	-		RR42_RS08685	0.52	-1.2
1,820,877	-		RR42_RS08685	0.52	+1.2
1,820,975	+		RR42_RS08685	0.70	+0.5
1,821,031	+		RR42_RS08685	0.81	+1.0
1,821,032	-		RR42_RS08685	0.81	-0.8
1,821,055	+		RR42_RS08685	0.85	-0.2
1,821,055	+		RR42_RS08685	0.85	+0.2
1,821,055	+		RR42_RS08685	0.85	+0.3
1,821,056	-		RR42_RS08685	0.86	+0.4
1,821,056	-		RR42_RS08685	0.86	+1.5
1,821,143	-				+0.1
1,821,143	-				-0.5
1,821,143	-				-2.1
1,821,199	+				+0.0
1,821,205	+		RR42_RS08690	0.11	+2.5
1,821,429	+		RR42_RS08690	0.64	+0.2
1,821,429	+		RR42_RS08690	0.64	+1.0
1,821,430	-		RR42_RS08690	0.64	-1.8
1,821,708	+		RR42_RS08695	0.39	+0.4
1,821,709	-		RR42_RS08695	0.39	-0.2
1,821,709	-		RR42_RS08695	0.39	-0.4
1,821,830	-		RR42_RS08695	0.70	+0.5
1,821,876	-		RR42_RS08695	0.82	-1.5
1,821,876	-		RR42_RS08695	0.82	-0.3
1,821,879	+		RR42_RS08695	0.82	-0.3
1,821,880	-		RR42_RS08695	0.83	+0.2
1,821,880	-		RR42_RS08695	0.83	-0.8
1,821,904	+		RR42_RS08695	0.89	-0.1
1,821,905	-		RR42_RS08695	0.89	+0.4
1,821,905	-		RR42_RS08695	0.89	-1.2
1,822,179	+		RR42_RS08700	0.65	+0.5
1,822,179	+		RR42_RS08700	0.65	-0.8
1,822,180	-		RR42_RS08700	0.65	+1.1
1,822,180	-		RR42_RS08700	0.65	-0.3
1,822,182	+		RR42_RS08700	0.66	-1.5
1,822,186	-		RR42_RS08700	0.67	-1.3
1,822,220	+		RR42_RS08700	0.76	-0.1
1,822,278	+				+0.1
1,822,346	-				-0.3
1,822,363	+				+0.5
1,822,364	-				+0.4
1,822,364	-				-1.5
1,822,364	-				+1.0
1,822,463	+				+0.9
1,822,463	+				-0.3
1,822,498	+				-0.3
1,822,499	-				+1.5
1,822,757	-		RR42_RS08705	0.44	-0.2
1,822,757	-		RR42_RS08705	0.44	-2.2
1,822,929	+		RR42_RS08705	0.68	+0.8
1,822,930	-		RR42_RS08705	0.69	-0.3