Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06205

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
1,360,569	+				+0.7
1,360,569	+				-0.2
1,360,569	+				-0.2
1,360,569	+				+0.7
1,360,569	+				-0.2
1,360,570	-				+1.6
1,360,570	-				+1.0
1,360,571	+				-0.3
1,360,593	+				-1.0
1,360,593	+				-0.1
1,360,594	-				+0.7
1,360,594	-				-0.4
1,360,621	+				-0.5
1,360,621	+				-0.2
1,360,643	+				-2.2
1,360,644	-				+0.0
1,360,644	-				+0.9
1,360,667	-				-0.0
1,360,667	-				+0.6
1,360,673	-				+0.4
1,360,687	-				-1.1
1,361,083	-		RR42_RS06200	0.46	-0.3
1,361,090	+		RR42_RS06200	0.47	-0.5
1,361,090	+		RR42_RS06200	0.47	+0.1
1,361,090	+		RR42_RS06200	0.47	-0.9
1,361,091	-		RR42_RS06200	0.47	-2.3
1,361,174	+		RR42_RS06200	0.57	-1.1
1,361,373	+		RR42_RS06200	0.79	-0.2
1,361,383	-		RR42_RS06200	0.80	-2.8
1,361,383	-		RR42_RS06200	0.80	-0.9
1,361,402	+		RR42_RS06200	0.83	+0.1
1,361,447	+		RR42_RS06200	0.88	-0.6
1,361,469	-				+0.1
1,361,573	+				+3.0
1,361,574	-				+1.6
1,361,574	-				+1.9
1,361,591	+				+0.9
1,361,591	+				-0.9
1,361,591	+				-1.4
1,361,592	-				+0.9
1,361,592	-				+0.0
1,361,687	-		RR42_RS06205	0.34	-0.3
1,361,770	-		RR42_RS06205	0.57	+0.7
1,361,804	+		RR42_RS06205	0.67	-0.4
1,361,804	+		RR42_RS06205	0.67	+0.0
1,361,804	+		RR42_RS06205	0.67	+0.0
1,361,805	-		RR42_RS06205	0.67	-1.0
1,361,805	-		RR42_RS06205	0.67	-2.4
1,361,990	-				-0.7
1,362,020	+				-0.2
1,362,020	+				-1.2
1,362,097	+				+0.1
1,362,098	-				-1.8
1,362,125	-				+0.4
1,362,126	+				-0.5
1,362,126	+				+0.7
1,362,142	-				-0.6
1,362,280	+				-2.2
1,362,281	-				-1.2
1,362,281	-				-0.3
1,362,306	+				-1.3
1,362,490	+				-0.8
1,362,491	-				-2.8
1,362,602	-				+0.9
1,362,862	+		RR42_RS06210	0.22	-1.6