Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06095
Experiment: R2A with Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,336,560 | + | RR42_RS06090 | 0.47 | -2.7 | |
1,336,870 | + | RR42_RS06090 | 0.65 | -1.4 | |
1,336,870 | + | RR42_RS06090 | 0.65 | -1.5 | |
1,336,871 | - | RR42_RS06090 | 0.65 | +2.0 | |
1,337,146 | + | RR42_RS06090 | 0.82 | -2.2 | |
1,337,147 | - | RR42_RS06090 | 0.82 | -1.5 | |
1,337,218 | + | RR42_RS06090 | 0.86 | -4.6 | |
1,337,219 | - | RR42_RS06090 | 0.86 | -3.5 | |
1,337,269 | + | RR42_RS06090 | 0.89 | -5.0 | |
1,337,495 | - | +0.2 | |||
1,337,495 | - | -1.0 | |||
1,337,974 | + | RR42_RS06095 | 0.44 | -2.1 | |
1,338,050 | + | RR42_RS06095 | 0.50 | +2.0 | |
1,338,350 | - | RR42_RS06095 | 0.77 | -1.6 | |
1,338,623 | - | -2.2 | |||
1,338,623 | - | +0.4 | |||
1,338,650 | + | +0.3 |
Or see this region's nucleotide sequence