Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05100
Experiment: R2A with Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,124,883 | + | RR42_RS05095 | 0.15 | -0.0 | |
1,125,349 | + | RR42_RS05095 | 0.61 | -0.3 | |
1,125,570 | + | RR42_RS05095 | 0.83 | +1.7 | |
1,125,570 | + | RR42_RS05095 | 0.83 | +1.4 | |
1,125,571 | - | RR42_RS05095 | 0.83 | -0.9 | |
1,125,675 | + | +0.1 | |||
1,125,843 | + | +1.1 | |||
1,125,878 | + | RR42_RS05100 | 0.11 | -1.1 | |
1,126,344 | + | RR42_RS05100 | 0.60 | -0.7 | |
1,126,345 | - | RR42_RS05100 | 0.60 | -1.1 | |
1,126,345 | - | RR42_RS05100 | 0.60 | +0.6 | |
1,126,397 | + | RR42_RS05100 | 0.65 | -1.2 | |
1,126,398 | - | RR42_RS05100 | 0.65 | +0.6 | |
1,127,608 | + | +0.9 | |||
1,127,608 | + | -1.0 |
Or see this region's nucleotide sequence