Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04880

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
1,081,827	+				+1.1
1,081,827	+				-0.3
1,081,828	-				-0.3
1,081,828	-				-0.1
1,081,961	-				-0.7
1,081,961	-				+0.1
1,082,052	+				+1.3
1,082,052	+				-0.5
1,082,052	+				-0.3
1,082,052	+				-0.5
1,082,053	-				-1.8
1,082,053	-				-0.0
1,082,149	+				-1.1
1,082,149	+				-0.1
1,082,149	+				+0.5
1,082,149	+				+0.7
1,082,150	-				-1.0
1,082,150	-				-0.5
1,082,152	+				-0.5
1,082,152	+				+0.8
1,082,152	+				+0.2
1,082,153	-				-1.3
1,082,153	-				+0.3
1,082,153	-				-0.3
1,082,357	+		RR42_RS04875	0.22	-0.2
1,082,357	+		RR42_RS04875	0.22	-1.7
1,082,394	-		RR42_RS04875	0.29	-0.8
1,082,394	-		RR42_RS04875	0.29	-0.2
1,082,394	-		RR42_RS04875	0.29	-0.8
1,082,394	-		RR42_RS04875	0.29	-0.8
1,082,394	-		RR42_RS04875	0.29	+0.0
1,082,420	+		RR42_RS04875	0.34	+1.5
1,082,420	+		RR42_RS04875	0.34	+0.1
1,082,421	-		RR42_RS04875	0.35	-0.2
1,082,421	-		RR42_RS04875	0.35	-0.8
1,082,627	-		RR42_RS04875	0.75	+1.1
1,082,627	-		RR42_RS04875	0.75	+0.3
1,082,747	+				+0.7
1,083,105	+		RR42_RS04880	0.22	-0.3
1,083,105	+		RR42_RS04880	0.22	-3.2
1,083,107	+		RR42_RS04880	0.22	+0.1
1,083,108	-		RR42_RS04880	0.22	-1.3
1,083,108	-		RR42_RS04880	0.22	-0.9
1,083,194	+		RR42_RS04880	0.29	+0.8
1,083,195	-		RR42_RS04880	0.29	-0.7
1,083,212	+		RR42_RS04880	0.31	-1.5
1,083,267	-		RR42_RS04880	0.35	-0.1
1,083,275	+		RR42_RS04880	0.36	-1.5
1,083,320	+		RR42_RS04880	0.39	-0.8
1,083,320	+		RR42_RS04880	0.39	-0.8
1,083,320	+		RR42_RS04880	0.39	-2.5
1,083,320	+		RR42_RS04880	0.39	-2.4
1,083,392	+		RR42_RS04880	0.45	-0.3
1,083,393	-		RR42_RS04880	0.45	-0.4
1,083,393	-		RR42_RS04880	0.45	+0.1
1,083,477	-		RR42_RS04880	0.52	-0.5
1,083,809	-		RR42_RS04880	0.78	+0.5
1,083,854	+		RR42_RS04880	0.82	-0.5
1,083,920	+		RR42_RS04880	0.87	-0.2
1,083,949	-		RR42_RS04880	0.90	-0.3
1,083,957	-				+1.6
1,084,222	+		RR42_RS04885	0.24	-0.3
1,084,333	+		RR42_RS04885	0.42	-0.9
1,084,333	+		RR42_RS04885	0.42	+1.1
1,084,334	-		RR42_RS04885	0.42	+0.1
1,084,334	-		RR42_RS04885	0.42	-0.0
1,084,336	+		RR42_RS04885	0.42	-0.5
1,084,336	+		RR42_RS04885	0.42	-1.6
1,084,337	-		RR42_RS04885	0.43	+0.1
1,084,337	-		RR42_RS04885	0.43	+0.1
1,084,337	-		RR42_RS04885	0.43	+0.4
1,084,337	-		RR42_RS04885	0.43	+1.1
1,084,337	-		RR42_RS04885	0.43	+0.1
1,084,339	+		RR42_RS04885	0.43	-1.4
1,084,340	-		RR42_RS04885	0.43	-1.5
1,084,340	-		RR42_RS04885	0.43	-1.9
1,084,442	-		RR42_RS04885	0.60	+2.1
1,084,704	-				+0.1
1,084,895	+		RR42_RS04890	0.26	+1.1
1,084,896	-		RR42_RS04890	0.27	-0.2