Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS00035

Experiment: R2A with Cisplatin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.001 mg/ml
12,313	+		RR42_RS00030	0.69	-0.4
12,346	+		RR42_RS00030	0.70	-1.2
12,346	+		RR42_RS00030	0.70	+0.9
12,346	+		RR42_RS00030	0.70	+1.1
12,346	+		RR42_RS00030	0.70	+0.0
12,347	-		RR42_RS00030	0.70	-1.6
12,390	+		RR42_RS00030	0.72	-0.1
12,401	-		RR42_RS00030	0.72	-0.5
12,401	-		RR42_RS00030	0.72	+1.1
12,450	+		RR42_RS00030	0.75	+0.7
12,450	+		RR42_RS00030	0.75	-1.9
12,450	+		RR42_RS00030	0.75	-0.3
12,463	-		RR42_RS00030	0.75	-0.7
12,512	+		RR42_RS00030	0.77	-0.4
12,512	+		RR42_RS00030	0.77	+1.0
12,512	+		RR42_RS00030	0.77	-0.4
12,512	+		RR42_RS00030	0.77	+0.3
12,513	-		RR42_RS00030	0.77	-0.8
12,565	+		RR42_RS00030	0.80	-0.2
12,566	-		RR42_RS00030	0.80	-0.6
12,566	-		RR42_RS00030	0.80	+0.2
12,681	+		RR42_RS00030	0.85	-0.2
12,681	+		RR42_RS00030	0.85	+0.1
12,681	+		RR42_RS00030	0.85	-1.1
12,682	-		RR42_RS00030	0.85	+2.7
12,688	+		RR42_RS00030	0.85	+0.1
12,689	-		RR42_RS00030	0.85	+0.3
12,689	-		RR42_RS00030	0.85	-0.5
12,689	-		RR42_RS00030	0.85	-0.1
12,740	+		RR42_RS00030	0.87	-1.0
12,741	-		RR42_RS00030	0.87	-0.5
12,743	+		RR42_RS00030	0.87	+1.8
12,744	-		RR42_RS00030	0.87	+0.8
12,744	-		RR42_RS00030	0.87	+1.6
12,744	-		RR42_RS00030	0.87	-0.8
12,758	+		RR42_RS00030	0.88	+0.9
12,758	+		RR42_RS00030	0.88	-0.7
12,759	-		RR42_RS00030	0.88	+0.7
12,759	-		RR42_RS00030	0.88	-0.7
12,759	-		RR42_RS00030	0.88	+0.7
12,759	-		RR42_RS00030	0.88	+1.5
12,766	+		RR42_RS00030	0.88	+0.2
12,821	+				+2.1
12,824	+				-1.7
12,825	-				-0.6
12,874	+				+3.2
12,874	+				-0.5
12,874	+				-0.0
12,875	-				-0.7
12,884	+				-0.4
12,884	+				-0.4
12,885	-				-0.8
12,885	-				+1.1
12,885	-				+0.2
12,954	+				-0.4
12,973	+				+0.9
12,973	+				+0.9
12,973	+				-0.3
12,974	-				-0.0
13,079	+				-2.4
13,080	-				-0.7
13,127	+				-1.5
13,127	+				+0.8
13,128	-				+0.5
13,128	-				-0.5
13,583	+		RR42_RS00035	0.70	-0.4
13,639	+		RR42_RS00035	0.80	-1.4
13,640	-		RR42_RS00035	0.80	-0.9
13,684	-		RR42_RS00035	0.88	+1.2
13,686	+		RR42_RS00035	0.88	-2.2
13,686	+		RR42_RS00035	0.88	-0.5
13,686	+		RR42_RS00035	0.88	+0.6
13,687	-		RR42_RS00035	0.88	+0.5
13,792	-				-0.0
13,792	-				-1.8
13,879	-				+0.1
13,879	-				-0.0
13,879	-				-1.2
13,901	+				+0.5
13,901	+				-0.5
13,902	-				-1.6
13,902	-				+0.8
13,902	-				-0.2
13,902	-				-1.7
14,067	-		RR42_RS00040	0.16	+0.8
14,067	-		RR42_RS00040	0.16	+0.3
14,130	+		RR42_RS00040	0.26	-1.6
14,131	-		RR42_RS00040	0.26	-0.7
14,131	-		RR42_RS00040	0.26	+0.5
14,184	+		RR42_RS00040	0.34	+0.5
14,184	+		RR42_RS00040	0.34	+2.1
14,184	+		RR42_RS00040	0.34	-0.2
14,185	-		RR42_RS00040	0.34	-0.9
14,185	-		RR42_RS00040	0.34	-1.8
14,504	+		RR42_RS00040	0.86	-1.2
14,505	-		RR42_RS00040	0.86	+0.2
14,573	+				-1.3
14,574	-				-1.5
14,575	+				+0.8
14,601	-				+1.5
14,617	-				+0.3
14,617	-				-0.3