Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS00015
Experiment: R2A with Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,041 | + | -0.7 | |||
4,041 | + | +1.2 | |||
4,144 | + | +0.9 | |||
4,215 | + | +1.1 | |||
6,838 | + | -0.6 | |||
6,863 | + | -0.5 | |||
6,931 | - | +1.5 | |||
6,952 | - | +0.1 | |||
7,032 | + | +0.7 | |||
7,033 | - | +2.4 | |||
7,037 | + | -0.3 | |||
7,037 | + | -0.1 | |||
7,093 | - | -0.4 | |||
7,098 | + | +0.9 | |||
7,099 | - | +0.0 | |||
7,099 | - | -1.8 | |||
7,151 | + | +0.8 | |||
7,304 | + | RR42_RS00020 | 0.28 | +0.4 | |
7,305 | - | RR42_RS00020 | 0.28 | +1.3 | |
7,326 | + | RR42_RS00020 | 0.31 | +0.9 | |
7,329 | + | RR42_RS00020 | 0.31 | +0.2 | |
7,352 | + | RR42_RS00020 | 0.35 | +0.5 | |
7,402 | - | RR42_RS00020 | 0.43 | +0.6 | |
7,607 | + | RR42_RS00020 | 0.75 | -0.7 | |
7,608 | - | RR42_RS00020 | 0.75 | -0.6 | |
7,608 | - | RR42_RS00020 | 0.75 | +2.0 | |
7,642 | - | RR42_RS00020 | 0.80 | +0.0 | |
7,663 | + | RR42_RS00020 | 0.83 | +1.1 |
Or see this region's nucleotide sequence