Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1804

Experiment: KB with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Dimethyl Sulfoxide 1 vol%
2,076,684	-		Psyr_1803	0.38	-1.0
2,076,963	+		Psyr_1803	0.67	-1.3
2,077,361	+				-0.3
2,077,362	-				+0.3
2,077,458	+				+1.8
2,077,458	+				+0.3
2,077,458	+				+1.3
2,077,458	+				+0.8
2,077,459	-				+1.2
2,077,459	-				+2.2
2,077,530	+				-0.3
2,077,546	-		Psyr_1804	0.11	+0.6
2,077,566	+		Psyr_1804	0.14	+0.2
2,077,566	+		Psyr_1804	0.14	+1.1
2,077,566	+		Psyr_1804	0.14	-0.0
2,077,567	-		Psyr_1804	0.14	-0.6
2,077,567	-		Psyr_1804	0.14	-0.7
2,077,567	-		Psyr_1804	0.14	-0.0
2,077,567	-		Psyr_1804	0.14	-0.1
2,077,608	+		Psyr_1804	0.19	-0.6
2,077,608	+		Psyr_1804	0.19	+0.7
2,077,608	+		Psyr_1804	0.19	-0.6
2,077,608	+		Psyr_1804	0.19	-0.2
2,077,608	+		Psyr_1804	0.19	+0.2
2,077,609	-		Psyr_1804	0.19	-1.3
2,077,609	-		Psyr_1804	0.19	+1.9
2,077,609	-		Psyr_1804	0.19	+0.1
2,077,609	-		Psyr_1804	0.19	+0.9
2,077,609	-		Psyr_1804	0.19	-0.4
2,077,609	-		Psyr_1804	0.19	-2.6
2,077,609	-		Psyr_1804	0.19	-1.5
2,077,609	-		Psyr_1804	0.19	+0.6
2,077,609	-		Psyr_1804	0.19	-0.2
2,077,644	+		Psyr_1804	0.24	-0.7
2,077,644	+		Psyr_1804	0.24	-0.0
2,077,644	+		Psyr_1804	0.24	+0.8
2,077,645	-		Psyr_1804	0.24	+0.2
2,077,731	+		Psyr_1804	0.35	+1.4
2,077,732	-		Psyr_1804	0.35	-0.4
2,077,797	+		Psyr_1804	0.43	+0.6
2,077,890	+		Psyr_1804	0.55	-0.1
2,077,890	+		Psyr_1804	0.55	+1.4
2,077,890	+		Psyr_1804	0.55	+0.0
2,077,891	-		Psyr_1804	0.55	+0.4
2,077,986	+		Psyr_1804	0.67	+0.8
2,077,986	+		Psyr_1804	0.67	+0.7
2,077,987	-		Psyr_1804	0.67	+0.2
2,077,987	-		Psyr_1804	0.67	-0.1
2,077,987	-		Psyr_1804	0.67	-0.1
2,078,026	-		Psyr_1804	0.72	-0.1
2,078,089	+		Psyr_1804	0.80	+1.2
2,078,090	-		Psyr_1804	0.81	+0.2
2,078,140	-		Psyr_1804	0.87	-0.8
2,078,149	+		Psyr_1804	0.88	+1.9
2,078,152	+		Psyr_1804	0.88	+0.7
2,078,152	+		Psyr_1804	0.88	-0.5
2,078,153	-		Psyr_1804	0.89	+0.6
2,078,153	-		Psyr_1804	0.89	+1.6
2,078,153	-		Psyr_1804	0.89	-1.4
2,078,217	-				-0.7
2,078,233	+				+0.6
2,078,261	+				-0.7
2,078,261	+				-0.5
2,078,262	-				-0.2
2,078,262	-				+0.9
2,078,262	-				+0.2
2,078,262	-				+0.2
2,078,262	-				-0.6
2,078,290	+				-0.6
2,078,290	+				+0.0
2,078,290	+				+0.2
2,078,290	+				+0.3
2,078,290	+				-0.2
2,078,291	-				-0.5
2,078,291	-				+0.4
2,078,291	-				+0.2
2,078,291	-				-0.4
2,078,291	-				-1.3
2,078,291	-				+1.1
2,078,320	-				-0.4
2,078,388	+				+0.9
2,078,644	+				-0.4
2,078,680	-				-1.4
2,078,869	-		Psyr_1805	0.20	+0.5
2,079,026	+		Psyr_1805	0.32	+0.1
2,079,026	+		Psyr_1805	0.32	+0.4
2,079,026	+		Psyr_1805	0.32	-1.2
2,079,026	+		Psyr_1805	0.32	+1.8
2,079,026	+		Psyr_1805	0.32	+0.7
2,079,027	-		Psyr_1805	0.32	-0.4
2,079,027	-		Psyr_1805	0.32	-0.2
2,079,027	-		Psyr_1805	0.32	-0.1
2,079,027	-		Psyr_1805	0.32	+0.6
2,079,096	+		Psyr_1805	0.38	-0.3
2,079,104	+		Psyr_1805	0.38	+1.2
2,079,105	-		Psyr_1805	0.38	-0.8
2,079,105	-		Psyr_1805	0.38	-0.0
2,079,158	+		Psyr_1805	0.43	+1.2
2,079,159	-		Psyr_1805	0.43	+0.9
2,079,159	-		Psyr_1805	0.43	-0.6
2,079,171	-		Psyr_1805	0.44	+2.0
2,079,224	+		Psyr_1805	0.48	+1.2
2,079,224	+		Psyr_1805	0.48	+0.8
2,079,224	+		Psyr_1805	0.48	+0.1
2,079,224	+		Psyr_1805	0.48	+0.3
2,079,224	+		Psyr_1805	0.48	-0.8
2,079,225	-		Psyr_1805	0.48	-0.8
2,079,225	-		Psyr_1805	0.48	-1.5
2,079,225	-		Psyr_1805	0.48	+0.3
2,079,225	-		Psyr_1805	0.48	+0.1