Experiment: KB with Dimethyl Sulfoxide 1 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0623 and Psyr_0624 are separated by 353 nucleotides Psyr_0624 and Psyr_0625 are separated by 110 nucleotides Psyr_0625 and Psyr_0626 are separated by 3 nucleotides Psyr_0626 and Psyr_0627 are separated by 241 nucleotides
Psyr_0623: Psyr_0623 - Peptidase S24, S26A and S26B, at 712,693 to 713,424
_0623
Psyr_0624: Psyr_0624 - Inorganic diphosphatase, at 713,778 to 714,305
_0624
Psyr_0625: Psyr_0625 - Protein of unknown function DUF980, at 714,416 to 715,225
_0625
Psyr_0626: Psyr_0626 - DedA, at 715,229 to 715,876
_0626
Psyr_0627: Psyr_0627 - Ethanolamine ammonia-lyase light chain, at 716,118 to 716,966
_0627
Position (kb) 714
715
716 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.418 kb on + strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.419 kb on - strand at 713.458 kb on + strand at 713.458 kb on + strand at 713.458 kb on + strand at 713.458 kb on + strand at 713.458 kb on + strand at 713.515 kb on + strand at 713.537 kb on + strand at 713.537 kb on + strand at 713.538 kb on - strand at 713.538 kb on - strand at 713.538 kb on - strand at 713.538 kb on - strand at 713.538 kb on - strand at 713.553 kb on + strand at 713.577 kb on + strand at 713.577 kb on + strand at 713.578 kb on - strand at 713.578 kb on - strand at 713.578 kb on - strand at 713.631 kb on + strand at 713.710 kb on + strand at 714.356 kb on - strand at 714.373 kb on - strand at 714.373 kb on - strand at 714.379 kb on - strand at 714.379 kb on - strand at 714.379 kb on - strand at 714.379 kb on - strand at 714.379 kb on - strand at 714.483 kb on + strand at 714.504 kb on + strand, within Psyr_0625 at 714.505 kb on - strand, within Psyr_0625 at 714.552 kb on + strand, within Psyr_0625 at 714.552 kb on + strand, within Psyr_0625 at 714.553 kb on - strand, within Psyr_0625 at 714.597 kb on + strand, within Psyr_0625 at 714.598 kb on - strand, within Psyr_0625 at 714.773 kb on + strand, within Psyr_0625 at 714.773 kb on + strand, within Psyr_0625 at 714.773 kb on + strand, within Psyr_0625 at 714.773 kb on + strand, within Psyr_0625 at 714.773 kb on + strand, within Psyr_0625 at 714.773 kb on + strand, within Psyr_0625 at 714.773 kb on + strand, within Psyr_0625 at 714.773 kb on + strand, within Psyr_0625 at 714.774 kb on - strand, within Psyr_0625 at 714.774 kb on - strand, within Psyr_0625 at 714.774 kb on - strand, within Psyr_0625 at 714.774 kb on - strand, within Psyr_0625 at 714.780 kb on + strand, within Psyr_0625 at 714.780 kb on + strand, within Psyr_0625 at 714.781 kb on - strand, within Psyr_0625 at 714.806 kb on + strand, within Psyr_0625 at 715.133 kb on - strand, within Psyr_0625 at 715.160 kb on + strand at 715.160 kb on + strand at 715.160 kb on + strand at 715.268 kb on + strand at 715.268 kb on + strand at 715.527 kb on + strand, within Psyr_0626 at 715.528 kb on - strand, within Psyr_0626 at 715.552 kb on - strand, within Psyr_0626 at 715.552 kb on - strand, within Psyr_0626 at 715.552 kb on - strand, within Psyr_0626 at 715.552 kb on - strand, within Psyr_0626 at 715.620 kb on + strand, within Psyr_0626 at 715.620 kb on + strand, within Psyr_0626 at 715.620 kb on + strand, within Psyr_0626 at 715.620 kb on + strand, within Psyr_0626 at 715.620 kb on + strand, within Psyr_0626 at 715.620 kb on + strand, within Psyr_0626 at 715.620 kb on + strand, within Psyr_0626 at 715.620 kb on + strand, within Psyr_0626 at 715.620 kb on + strand, within Psyr_0626 at 715.621 kb on - strand, within Psyr_0626 at 715.621 kb on - strand, within Psyr_0626 at 715.621 kb on - strand, within Psyr_0626 at 715.621 kb on - strand, within Psyr_0626 at 715.621 kb on - strand, within Psyr_0626 at 715.621 kb on - strand, within Psyr_0626 at 715.621 kb on - strand, within Psyr_0626 at 715.621 kb on - strand, within Psyr_0626 at 715.621 kb on - strand, within Psyr_0626 at 715.621 kb on - strand, within Psyr_0626 at 715.621 kb on - strand, within Psyr_0626 at 715.794 kb on + strand, within Psyr_0626 at 715.795 kb on - strand, within Psyr_0626 at 715.804 kb on + strand, within Psyr_0626 at 715.805 kb on - strand, within Psyr_0626 at 715.805 kb on - strand, within Psyr_0626 at 715.805 kb on - strand, within Psyr_0626 at 715.805 kb on - strand, within Psyr_0626 at 715.805 kb on - strand, within Psyr_0626 at 715.805 kb on - strand, within Psyr_0626 at 715.805 kb on - strand, within Psyr_0626 at 715.809 kb on + strand, within Psyr_0626 at 715.809 kb on + strand, within Psyr_0626 at 715.809 kb on + strand, within Psyr_0626 at 715.810 kb on - strand, within Psyr_0626 at 715.810 kb on - strand, within Psyr_0626 at 715.810 kb on - strand, within Psyr_0626 at 715.810 kb on - strand, within Psyr_0626 at 715.852 kb on + strand at 715.852 kb on + strand at 715.853 kb on - strand at 715.853 kb on - strand at 715.939 kb on + strand at 715.941 kb on + strand at 715.941 kb on + strand at 715.941 kb on + strand at 715.941 kb on + strand at 715.941 kb on + strand at 715.941 kb on + strand at 715.941 kb on + strand at 715.941 kb on + strand at 715.941 kb on + strand at 715.941 kb on + strand at 715.941 kb on + strand at 715.941 kb on + strand at 715.941 kb on + strand at 715.941 kb on + strand at 715.941 kb on + strand at 715.942 kb on - strand at 715.942 kb on - strand at 715.942 kb on - strand at 715.942 kb on - strand at 715.942 kb on - strand at 715.942 kb on - strand at 715.942 kb on - strand at 715.942 kb on - strand at 715.942 kb on - strand at 715.942 kb on - strand at 715.942 kb on - strand at 715.942 kb on - strand at 715.942 kb on - strand at 715.974 kb on - strand at 716.003 kb on + strand at 716.003 kb on + strand at 716.004 kb on - strand at 716.004 kb on - strand at 716.035 kb on + strand at 716.035 kb on + strand at 716.036 kb on - strand at 716.036 kb on - strand at 716.049 kb on + strand at 716.102 kb on + strand at 716.102 kb on + strand at 716.103 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1 vol% remove 713,418 + +0.7 713,418 + +1.2 713,418 + +0.1 713,418 + +2.2 713,418 + +0.4 713,418 + -1.1 713,418 + +0.1 713,418 + +0.7 713,418 + -1.1 713,418 + -0.3 713,418 + -0.5 713,418 + +0.6 713,418 + -0.4 713,418 + +0.7 713,418 + -0.2 713,418 + +0.9 713,418 + +0.0 713,418 + -1.1 713,418 + +0.2 713,418 + +0.5 713,418 + +0.4 713,419 - -0.2 713,419 - -2.1 713,419 - +1.7 713,419 - +0.1 713,419 - +0.3 713,419 - -0.1 713,419 - -0.6 713,419 - -0.0 713,419 - +0.2 713,419 - +1.3 713,419 - -2.5 713,419 - +0.1 713,419 - -0.3 713,419 - +1.4 713,419 - +0.7 713,419 - -0.4 713,419 - +0.0 713,419 - -1.1 713,419 - -1.7 713,419 - -0.1 713,419 - +0.5 713,419 - +0.2 713,419 - +0.0 713,419 - -0.5 713,419 - +0.9 713,458 + +0.2 713,458 + -0.9 713,458 + -0.4 713,458 + -0.5 713,458 + +0.2 713,515 + +0.2 713,537 + +0.7 713,537 + +0.9 713,538 - -0.1 713,538 - -0.7 713,538 - -0.1 713,538 - -1.1 713,538 - -0.8 713,553 + +0.5 713,577 + -1.6 713,577 + +0.1 713,578 - +0.1 713,578 - -1.3 713,578 - -0.9 713,631 + +1.0 713,710 + +3.2 714,356 - -1.2 714,373 - -0.7 714,373 - -0.8 714,379 - -0.7 714,379 - +0.9 714,379 - +1.1 714,379 - -0.9 714,379 - +0.4 714,483 + +0.1 714,504 + Psyr_0625 0.11 -0.6 714,505 - Psyr_0625 0.11 +0.6 714,552 + Psyr_0625 0.17 +1.9 714,552 + Psyr_0625 0.17 +0.5 714,553 - Psyr_0625 0.17 +0.9 714,597 + Psyr_0625 0.22 +0.5 714,598 - Psyr_0625 0.22 +1.3 714,773 + Psyr_0625 0.44 +0.6 714,773 + Psyr_0625 0.44 +0.4 714,773 + Psyr_0625 0.44 -1.2 714,773 + Psyr_0625 0.44 -0.1 714,773 + Psyr_0625 0.44 +1.3 714,773 + Psyr_0625 0.44 +0.3 714,773 + Psyr_0625 0.44 +1.0 714,773 + Psyr_0625 0.44 -0.2 714,774 - Psyr_0625 0.44 +0.7 714,774 - Psyr_0625 0.44 -2.0 714,774 - Psyr_0625 0.44 +1.4 714,774 - Psyr_0625 0.44 -0.4 714,780 + Psyr_0625 0.45 +0.0 714,780 + Psyr_0625 0.45 +0.9 714,781 - Psyr_0625 0.45 -0.3 714,806 + Psyr_0625 0.48 -0.1 715,133 - Psyr_0625 0.89 -1.5 715,160 + -0.0 715,160 + +0.3 715,160 + -0.2 715,268 + -1.3 715,268 + +0.5 715,527 + Psyr_0626 0.46 +0.3 715,528 - Psyr_0626 0.46 +0.2 715,552 - Psyr_0626 0.50 +0.1 715,552 - Psyr_0626 0.50 +1.3 715,552 - Psyr_0626 0.50 -0.7 715,552 - Psyr_0626 0.50 +0.3 715,620 + Psyr_0626 0.60 -2.6 715,620 + Psyr_0626 0.60 +0.9 715,620 + Psyr_0626 0.60 -0.1 715,620 + Psyr_0626 0.60 -1.1 715,620 + Psyr_0626 0.60 +0.1 715,620 + Psyr_0626 0.60 +0.9 715,620 + Psyr_0626 0.60 -0.7 715,620 + Psyr_0626 0.60 +0.3 715,620 + Psyr_0626 0.60 +0.7 715,621 - Psyr_0626 0.60 +1.3 715,621 - Psyr_0626 0.60 -0.1 715,621 - Psyr_0626 0.60 -1.0 715,621 - Psyr_0626 0.60 +0.6 715,621 - Psyr_0626 0.60 -0.3 715,621 - Psyr_0626 0.60 -0.6 715,621 - Psyr_0626 0.60 +0.7 715,621 - Psyr_0626 0.60 +2.3 715,621 - Psyr_0626 0.60 +0.4 715,621 - Psyr_0626 0.60 -0.4 715,621 - Psyr_0626 0.60 -0.3 715,794 + Psyr_0626 0.87 -1.4 715,795 - Psyr_0626 0.87 -0.1 715,804 + Psyr_0626 0.89 +0.6 715,805 - Psyr_0626 0.89 -0.1 715,805 - Psyr_0626 0.89 +0.3 715,805 - Psyr_0626 0.89 +2.2 715,805 - Psyr_0626 0.89 +0.6 715,805 - Psyr_0626 0.89 -0.4 715,805 - Psyr_0626 0.89 -0.1 715,805 - Psyr_0626 0.89 +1.9 715,809 + Psyr_0626 0.90 -0.3 715,809 + Psyr_0626 0.90 +0.2 715,809 + Psyr_0626 0.90 +2.0 715,810 - Psyr_0626 0.90 +0.9 715,810 - Psyr_0626 0.90 -0.2 715,810 - Psyr_0626 0.90 +1.4 715,810 - Psyr_0626 0.90 -0.6 715,852 + +0.1 715,852 + +0.3 715,853 - +1.9 715,853 - +0.4 715,939 + -1.1 715,941 + +0.2 715,941 + +0.1 715,941 + -0.8 715,941 + -2.1 715,941 + +1.0 715,941 + +0.3 715,941 + -0.5 715,941 + +0.6 715,941 + +0.6 715,941 + -1.2 715,941 + -1.6 715,941 + +0.5 715,941 + +1.8 715,941 + +0.5 715,941 + +1.3 715,942 - -3.9 715,942 - -3.1 715,942 - -0.1 715,942 - +0.4 715,942 - -0.8 715,942 - -0.1 715,942 - -0.1 715,942 - -1.3 715,942 - +0.4 715,942 - +2.7 715,942 - -1.0 715,942 - +0.0 715,942 - -0.1 715,974 - -1.6 716,003 + +0.2 716,003 + -0.5 716,004 - -0.1 716,004 - -0.9 716,035 + -0.1 716,035 + -1.3 716,036 - +0.5 716,036 - +0.0 716,049 + +0.0 716,102 + +1.3 716,102 + +1.4 716,103 - +1.3
Or see this region's nucleotide sequence