Experiment: D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS20810 and HSERO_RS20815 are separated by 37 nucleotides HSERO_RS20815 and HSERO_RS20820 are separated by 61 nucleotides HSERO_RS20820 and HSERO_RS20825 are separated by 1 nucleotides
HSERO_RS20810: HSERO_RS20810 - amidophosphoribosyltransferase, at 4,764,304 to 4,765,029
_RS20810
HSERO_RS20815: HSERO_RS20815 - tRNA methyltransferase, at 4,765,067 to 4,765,549
_RS20815
HSERO_RS20820: HSERO_RS20820 - ABC transporter ATP-binding protein, at 4,765,611 to 4,766,405
_RS20820
HSERO_RS20825: HSERO_RS20825 - ABC transporter permease, at 4,766,407 to 4,767,300
_RS20825
Position (kb) 4765
4766
4767 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4764.716 kb on + strand, within HSERO_RS20810 at 4764.873 kb on - strand, within HSERO_RS20810 at 4765.018 kb on + strand at 4765.026 kb on - strand at 4765.077 kb on - strand at 4765.240 kb on + strand, within HSERO_RS20815 at 4765.249 kb on + strand, within HSERO_RS20815 at 4765.259 kb on - strand, within HSERO_RS20815 at 4765.324 kb on + strand at 4765.346 kb on + strand, within HSERO_RS20815 at 4765.483 kb on + strand, within HSERO_RS20815 at 4765.515 kb on - strand at 4765.529 kb on + strand at 4765.685 kb on - strand at 4765.999 kb on + strand, within HSERO_RS20820 at 4766.262 kb on - strand at 4766.771 kb on + strand, within HSERO_RS20825 at 4767.007 kb on - strand, within HSERO_RS20825 at 4767.100 kb on - strand, within HSERO_RS20825 at 4767.172 kb on - strand, within HSERO_RS20825 at 4767.287 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Ribose (C) remove 4,764,716 + HSERO_RS20810 0.57 -1.4 4,764,873 - HSERO_RS20810 0.78 -0.3 4,765,018 + +0.6 4,765,026 - -0.3 4,765,077 - -1.0 4,765,240 + HSERO_RS20815 0.36 -0.3 4,765,249 + HSERO_RS20815 0.38 +0.5 4,765,259 - HSERO_RS20815 0.40 +0.3 4,765,324 + +2.2 4,765,346 + HSERO_RS20815 0.58 -1.2 4,765,483 + HSERO_RS20815 0.86 +0.3 4,765,515 - +0.7 4,765,529 + -1.6 4,765,685 - -3.0 4,765,999 + HSERO_RS20820 0.49 -1.5 4,766,262 - -0.9 4,766,771 + HSERO_RS20825 0.41 -0.5 4,767,007 - HSERO_RS20825 0.67 -1.3 4,767,100 - HSERO_RS20825 0.78 -1.4 4,767,172 - HSERO_RS20825 0.86 -2.1 4,767,287 + -0.1
Or see this region's nucleotide sequence