Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02497

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
2,644,998	+		CCNA_02496	0.39	-1.8
2,644,998	+		CCNA_02496	0.39	-0.6
2,645,043	+		CCNA_02496	0.42	+0.1
2,645,043	+		CCNA_02496	0.42	-1.4
2,645,043	+		CCNA_02496	0.42	-0.2
2,645,043	+		CCNA_02496	0.42	-2.3
2,645,043	+		CCNA_02496	0.42	-0.1
2,645,043	+		CCNA_02496	0.42	-2.6
2,645,043	+		CCNA_02496	0.42	-1.2
2,645,046	-		CCNA_02496	0.42	+0.6
2,645,048	+		CCNA_02496	0.42	-1.9
2,645,051	-		CCNA_02496	0.42	-1.5
2,645,051	-		CCNA_02496	0.42	-0.6
2,645,051	-		CCNA_02496	0.42	+0.9
2,645,051	-		CCNA_02496	0.42	-1.3
2,645,068	-		CCNA_02496	0.44	+0.7
2,645,089	-		CCNA_02496	0.45	+0.2
2,645,159	-		CCNA_02496	0.49	-0.7
2,645,168	+		CCNA_02496	0.50	+0.1
2,645,202	+		CCNA_02496	0.52	-1.5
2,645,210	-		CCNA_02496	0.53	-2.1
2,645,236	+		CCNA_02496	0.54	-1.8
2,645,236	+		CCNA_02496	0.54	-1.7
2,645,239	-		CCNA_02496	0.54	-0.7
2,645,244	-		CCNA_02496	0.55	-0.5
2,645,305	-		CCNA_02496	0.59	-1.3
2,645,322	+		CCNA_02496	0.60	-1.0
2,645,386	+		CCNA_02496	0.64	-1.7
2,645,394	-		CCNA_02496	0.64	-0.2
2,645,394	-		CCNA_02496	0.64	-2.3
2,645,394	-		CCNA_02496	0.64	-1.4
2,645,435	+		CCNA_02496	0.67	-1.5
2,645,435	+		CCNA_02496	0.67	-0.2
2,645,443	-		CCNA_02496	0.67	-1.2
2,645,443	-		CCNA_02496	0.67	-2.0
2,645,465	+		CCNA_02496	0.69	+0.2
2,645,527	+		CCNA_02496	0.73	-2.0
2,645,535	-		CCNA_02496	0.73	-1.5
2,645,535	-		CCNA_02496	0.73	+0.7
2,645,607	+		CCNA_02496	0.78	-1.9
2,645,615	-		CCNA_02496	0.78	-0.3
2,645,615	-		CCNA_02496	0.78	-0.9
2,645,615	-		CCNA_02496	0.78	-0.8
2,645,677	+		CCNA_02496	0.82	-1.8
2,645,710	+		CCNA_02496	0.84	+1.8
2,645,710	+		CCNA_02496	0.84	+1.3
2,645,718	-		CCNA_02496	0.85	-1.5
2,645,828	-				-0.8
2,645,851	+				-1.5
2,645,881	-				-1.6
2,645,882	-				-3.2
2,645,914	-				+0.1
2,645,915	+				-3.0
2,645,923	-				-0.8
2,645,923	-				-1.2
2,645,961	+				-1.4
2,645,969	-				-2.0
2,645,969	-				-0.7
2,646,008	+				-0.6
2,646,009	-				+0.2
2,646,016	-				-0.2
2,646,034	-				-0.0
2,646,041	-				-3.0
2,646,056	+				+0.7
2,646,098	-				+0.5
2,646,148	-				-2.0
2,646,172	-		CCNA_02497	0.11	+0.6
2,646,174	+		CCNA_02497	0.11	-2.2
2,646,190	-		CCNA_02497	0.12	-1.2
2,646,206	+		CCNA_02497	0.13	-2.4
2,646,211	+		CCNA_02497	0.13	-1.8
2,646,212	-		CCNA_02497	0.14	-0.1
2,646,252	-		CCNA_02497	0.16	-0.0
2,646,252	-		CCNA_02497	0.16	+0.5
2,646,252	-		CCNA_02497	0.16	-0.6
2,646,308	+		CCNA_02497	0.19	-1.5
2,646,352	+		CCNA_02497	0.21	-3.5
2,646,352	+		CCNA_02497	0.21	-3.7
2,646,352	+		CCNA_02497	0.21	-2.4
2,646,352	+		CCNA_02497	0.21	-0.2
2,646,352	+		CCNA_02497	0.21	-1.9
2,646,355	-		CCNA_02497	0.21	+0.4
2,646,360	-		CCNA_02497	0.22	-2.5
2,646,360	-		CCNA_02497	0.22	+0.8
2,646,360	-		CCNA_02497	0.22	-2.9
2,646,360	-		CCNA_02497	0.22	+0.8
2,646,360	-		CCNA_02497	0.22	-2.2
2,646,360	-		CCNA_02497	0.22	+1.0
2,646,416	-		CCNA_02497	0.25	+0.6
2,646,422	-		CCNA_02497	0.25	-1.8
2,646,431	+		CCNA_02497	0.26	-0.7
2,646,439	-		CCNA_02497	0.26	-1.3
2,646,458	+		CCNA_02497	0.27	-1.5
2,646,505	+		CCNA_02497	0.30	-2.2
2,646,510	+		CCNA_02497	0.30	-1.3
2,646,518	-		CCNA_02497	0.30	-1.6
2,646,518	-		CCNA_02497	0.30	-0.5
2,646,525	+		CCNA_02497	0.31	-3.1
2,646,533	-		CCNA_02497	0.31	-2.5
2,646,533	-		CCNA_02497	0.31	-1.3
2,646,540	+		CCNA_02497	0.32	-2.6
2,646,540	+		CCNA_02497	0.32	-2.1
2,646,540	+		CCNA_02497	0.32	-1.5
2,646,658	+		CCNA_02497	0.38	+1.2
2,646,661	-		CCNA_02497	0.38	-1.6
2,646,663	+		CCNA_02497	0.38	+0.3
2,646,670	-		CCNA_02497	0.39	-1.3
2,646,671	-		CCNA_02497	0.39	+0.4
2,646,671	-		CCNA_02497	0.39	-3.3
2,646,719	+		CCNA_02497	0.42	+0.5
2,646,719	+		CCNA_02497	0.42	-0.8
2,646,719	+		CCNA_02497	0.42	-2.0
2,646,719	+		CCNA_02497	0.42	+3.2
2,646,727	-		CCNA_02497	0.42	-0.4
2,646,727	-		CCNA_02497	0.42	-0.8
2,646,727	-		CCNA_02497	0.42	-2.5
2,646,727	-		CCNA_02497	0.42	-1.4
2,646,727	-		CCNA_02497	0.42	-2.4
2,646,727	-		CCNA_02497	0.42	-2.0
2,646,727	-		CCNA_02497	0.42	+0.5
2,646,727	-		CCNA_02497	0.42	-1.3
2,646,727	-		CCNA_02497	0.42	+0.3
2,646,727	-		CCNA_02497	0.42	-0.4
2,646,739	+		CCNA_02497	0.43	+0.2
2,646,754	+		CCNA_02497	0.44	-0.6
2,646,769	-		CCNA_02497	0.44	-1.4
2,646,784	-		CCNA_02497	0.45	-0.5
2,646,794	-		CCNA_02497	0.46	-0.8
2,646,848	+		CCNA_02497	0.49	-3.0
2,646,848	+		CCNA_02497	0.49	+1.6
2,646,856	-		CCNA_02497	0.49	-0.7
2,646,856	-		CCNA_02497	0.49	-0.4
2,646,856	-		CCNA_02497	0.49	-0.2
2,646,866	-		CCNA_02497	0.50	-1.2
2,646,873	-		CCNA_02497	0.50	-1.6
2,646,875	+		CCNA_02497	0.50	-2.5
2,646,875	+		CCNA_02497	0.50	-2.1
2,646,890	+		CCNA_02497	0.51	-3.2
2,646,891	+		CCNA_02497	0.51	-1.1
2,646,926	-		CCNA_02497	0.53	-2.2
2,647,000	-		CCNA_02497	0.57	-0.4
2,647,055	+		CCNA_02497	0.60	-1.6
2,647,065	+		CCNA_02497	0.61	+0.1
2,647,065	+		CCNA_02497	0.61	-2.1
2,647,073	-		CCNA_02497	0.61	-0.7
2,647,079	+		CCNA_02497	0.62	-0.8
2,647,116	-		CCNA_02497	0.64	-1.4
2,647,127	-		CCNA_02497	0.64	-1.1
2,647,142	+		CCNA_02497	0.65	+1.0
2,647,142	+		CCNA_02497	0.65	-1.1
2,647,150	-		CCNA_02497	0.65	-2.4
2,647,162	+		CCNA_02497	0.66	-3.4
2,647,170	-		CCNA_02497	0.67	-2.1
2,647,173	+		CCNA_02497	0.67	-1.6
2,647,207	-		CCNA_02497	0.69	-2.5
2,647,207	-		CCNA_02497	0.69	-1.2
2,647,207	-		CCNA_02497	0.69	-0.5
2,647,254	+		CCNA_02497	0.71	-0.9
2,647,285	+		CCNA_02497	0.73	-1.6
2,647,285	+		CCNA_02497	0.73	-0.4
2,647,287	+		CCNA_02497	0.73	-1.2
2,647,287	+		CCNA_02497	0.73	-1.2
2,647,295	-				+1.1
2,647,306	+		CCNA_02497	0.74	-2.7
2,647,331	+		CCNA_02497	0.75	-1.1
2,647,344	+		CCNA_02497	0.76	-0.9
2,647,344	+		CCNA_02497	0.76	+4.2
2,647,344	+		CCNA_02497	0.76	-0.5
2,647,352	-		CCNA_02497	0.77	-1.9
2,647,352	-		CCNA_02497	0.77	-1.4
2,647,354	+		CCNA_02497	0.77	-0.9
2,647,367	+		CCNA_02497	0.77	-0.3
2,647,367	+		CCNA_02497	0.77	-1.3
2,647,367	+		CCNA_02497	0.77	-0.9
2,647,387	-		CCNA_02497	0.79	-0.8
2,647,387	-		CCNA_02497	0.79	+0.1
2,647,397	-		CCNA_02497	0.79	-1.5
2,647,405	+		CCNA_02497	0.80	-0.1
2,647,432	+		CCNA_02497	0.81	+0.4
2,647,442	-		CCNA_02497	0.82	-1.6
2,647,447	-		CCNA_02497	0.82	-0.6
2,647,449	+		CCNA_02497	0.82	+0.3
2,647,449	+		CCNA_02497	0.82	-1.6
2,647,449	+		CCNA_02497	0.82	-0.4
2,647,457	-		CCNA_02497	0.82	+0.1
2,647,457	-		CCNA_02497	0.82	-2.3
2,647,483	-		CCNA_02497	0.84	-0.9
2,647,507	-		CCNA_02497	0.85	-0.8
2,647,527	+		CCNA_02497	0.86	-1.5
2,647,535	-		CCNA_02497	0.87	-2.9
2,647,542	+		CCNA_02497	0.87	-0.8
2,647,589	+		CCNA_02497	0.90	+0.1
2,647,597	-				-3.2
2,647,628	-				-0.2
2,647,630	+				-1.4
2,647,630	+				-1.8
2,647,630	+				-1.8
2,647,638	-				-0.2
2,647,638	-				+0.8
2,647,648	-				-1.1
2,647,738	+				-0.4
2,647,738	+				-2.7
2,647,746	+				-0.3
2,647,746	-				-1.9
2,647,746	-				+0.6
2,647,812	-				-2.1
2,647,862	+				-2.3
2,647,867	+				+2.4
2,647,870	-				-1.1
2,647,896	-				-1.5
2,647,989	+				-1.9
2,648,020	+				-0.6
2,648,028	+				-0.2
2,648,033	+				-2.9
2,648,035	+				-0.3
2,648,043	-				-2.4
2,648,054	+				+0.1
2,648,059	+				-0.5
2,648,080	+				+1.2
2,648,080	+				+0.1
2,648,085	+				+0.4
2,648,086	+				-1.1
2,648,093	-		CCNA_02498	0.11	-0.9
2,648,093	-		CCNA_02498	0.11	-1.3
2,648,093	-		CCNA_02498	0.11	-3.1
2,648,099	-		CCNA_02498	0.12	-2.4
2,648,113	+		CCNA_02498	0.14	-0.6
2,648,126	-		CCNA_02498	0.16	-1.2
2,648,126	-		CCNA_02498	0.16	+1.3
2,648,128	+		CCNA_02498	0.16	-0.4
2,648,128	+		CCNA_02498	0.16	-2.4
2,648,128	+		CCNA_02498	0.16	+0.1
2,648,234	-		CCNA_02498	0.32	-1.1
2,648,236	+		CCNA_02498	0.32	-0.8
2,648,236	+		CCNA_02498	0.32	-0.7
2,648,244	-		CCNA_02498	0.34	-1.3
2,648,262	-		CCNA_02498	0.36	-0.1
2,648,278	-		CCNA_02498	0.39	-1.3
2,648,289	+		CCNA_02498	0.40	-0.2
2,648,297	-		CCNA_02498	0.42	+0.7
2,648,309	+		CCNA_02498	0.44	-1.2
2,648,314	+		CCNA_02498	0.44	-1.2
2,648,314	+		CCNA_02498	0.44	-0.3
2,648,314	+		CCNA_02498	0.44	-0.2
2,648,322	-		CCNA_02498	0.46	-1.6
2,648,328	+		CCNA_02498	0.46	+0.1
2,648,328	+		CCNA_02498	0.46	-0.1
2,648,333	+		CCNA_02498	0.47	+0.7
2,648,333	+		CCNA_02498	0.47	+0.5
2,648,336	-		CCNA_02498	0.48	-2.9
2,648,336	-		CCNA_02498	0.48	-2.4
2,648,336	-		CCNA_02498	0.48	-0.4
2,648,341	-		CCNA_02498	0.48	-2.0
2,648,346	-		CCNA_02498	0.49	-1.2
2,648,350	+		CCNA_02498	0.50	+1.8
2,648,351	-		CCNA_02498	0.50	-0.7
2,648,351	-		CCNA_02498	0.50	-1.1
2,648,380	-		CCNA_02498	0.54	-0.2
2,648,421	+		CCNA_02498	0.61	-1.5
2,648,429	-		CCNA_02498	0.62	-1.5
2,648,437	+		CCNA_02498	0.63	+0.8
2,648,437	+		CCNA_02498	0.63	+0.1
2,648,437	+		CCNA_02498	0.63	-0.5
2,648,437	+		CCNA_02498	0.63	-2.1
2,648,445	-		CCNA_02498	0.64	-1.6
2,648,468	-		CCNA_02498	0.68	-0.9
2,648,509	+		CCNA_02498	0.74	+1.4
2,648,509	+		CCNA_02498	0.74	-0.2
2,648,517	-		CCNA_02498	0.75	-1.1
2,648,517	-		CCNA_02498	0.75	+0.4
2,648,528	-		CCNA_02498	0.77	-0.6
2,648,571	-		CCNA_02498	0.83	-2.3
2,648,591	-		CCNA_02498	0.86	-3.0
2,648,606	-		CCNA_02498	0.89	-2.1
2,648,618	-				-1.1
2,648,618	-				-0.7
2,648,655	-				-2.0
2,648,655	-				-0.7
2,648,673	+				-0.4
2,648,673	+				+0.3
2,648,678	+				+1.2
2,648,686	-				-0.6
2,648,690	+				+1.5
2,648,709	+				+0.9
2,648,719	+				+1.1
2,648,719	+				+2.3
2,648,754	+		CCNA_02499	0.20	-0.3
2,648,754	+		CCNA_02499	0.20	+1.4
2,648,762	-		CCNA_02499	0.22	-1.1
2,648,764	+		CCNA_02499	0.23	+0.2
2,648,764	-		CCNA_02499	0.23	-2.0
2,648,767	-		CCNA_02499	0.24	-0.5