Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03060 and SMc03061 are separated by 317 nucleotides SMc03061 and SMc03062 are separated by 251 nucleotides
SMc03060: SMc03060 - transcriptional regulator, at 756,368 to 757,438
SMc03060
SMc03061: SMc03061 - ABC transporter for D-maltose/D-trehalose/sucrose, substrate-binding component (AglE) <small>(from data)</small>, at 757,756 to 759,132
SMc03061
SMc03062: SMc03062 - ABC transporter for D-maltose/D-trehalose/sucrose, permease component 1 (AglF) <small>(from data)</small>, at 759,384 to 760,394
SMc03062
Position (kb) 757
758
759
760 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 756.944 kb on - strand, within SMc03060 at 756.966 kb on + strand, within SMc03060 at 757.058 kb on - strand, within SMc03060 at 757.058 kb on - strand, within SMc03060 at 757.059 kb on + strand, within SMc03060 at 757.059 kb on + strand, within SMc03060 at 757.060 kb on - strand, within SMc03060 at 757.060 kb on - strand, within SMc03060 at 757.258 kb on - strand, within SMc03060 at 757.514 kb on - strand at 757.984 kb on + strand, within SMc03061 at 757.984 kb on + strand, within SMc03061 at 757.985 kb on - strand, within SMc03061 at 757.990 kb on + strand, within SMc03061 at 758.023 kb on + strand, within SMc03061 at 758.024 kb on - strand, within SMc03061 at 758.041 kb on + strand, within SMc03061 at 758.065 kb on - strand, within SMc03061 at 758.188 kb on + strand, within SMc03061 at 758.188 kb on + strand, within SMc03061 at 758.188 kb on + strand, within SMc03061 at 758.188 kb on + strand, within SMc03061 at 758.188 kb on + strand, within SMc03061 at 758.188 kb on + strand, within SMc03061 at 758.189 kb on - strand, within SMc03061 at 758.189 kb on - strand, within SMc03061 at 758.224 kb on + strand, within SMc03061 at 758.225 kb on - strand, within SMc03061 at 758.225 kb on - strand, within SMc03061 at 758.225 kb on - strand, within SMc03061 at 758.227 kb on - strand, within SMc03061 at 758.254 kb on + strand, within SMc03061 at 758.297 kb on - strand, within SMc03061 at 758.326 kb on + strand, within SMc03061 at 758.492 kb on - strand, within SMc03061 at 758.492 kb on - strand, within SMc03061 at 758.516 kb on + strand, within SMc03061 at 758.517 kb on - strand, within SMc03061 at 758.668 kb on + strand, within SMc03061 at 758.668 kb on + strand, within SMc03061 at 758.669 kb on - strand, within SMc03061 at 758.669 kb on - strand, within SMc03061 at 758.669 kb on - strand, within SMc03061 at 758.746 kb on + strand, within SMc03061 at 758.746 kb on + strand, within SMc03061 at 758.746 kb on + strand, within SMc03061 at 758.746 kb on + strand, within SMc03061 at 758.747 kb on - strand, within SMc03061 at 758.747 kb on - strand, within SMc03061 at 758.782 kb on - strand, within SMc03061 at 758.914 kb on + strand, within SMc03061 at 758.939 kb on - strand, within SMc03061 at 759.105 kb on - strand at 759.212 kb on - strand at 759.212 kb on - strand at 759.212 kb on - strand at 759.212 kb on - strand at 759.312 kb on + strand at 759.313 kb on - strand at 759.330 kb on + strand at 759.330 kb on + strand at 759.331 kb on - strand at 759.589 kb on - strand, within SMc03062 at 759.589 kb on - strand, within SMc03062 at 759.598 kb on - strand, within SMc03062 at 759.670 kb on - strand, within SMc03062 at 759.806 kb on + strand, within SMc03062 at 759.879 kb on + strand, within SMc03062 at 759.880 kb on - strand, within SMc03062
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 756,944 - SMc03060 0.54 +2.9 756,966 + SMc03060 0.56 +1.8 757,058 - SMc03060 0.64 +2.6 757,058 - SMc03060 0.64 +2.3 757,059 + SMc03060 0.65 +2.8 757,059 + SMc03060 0.65 +2.7 757,060 - SMc03060 0.65 +2.5 757,060 - SMc03060 0.65 +2.3 757,258 - SMc03060 0.83 +2.9 757,514 - +1.6 757,984 + SMc03061 0.17 -3.8 757,984 + SMc03061 0.17 -0.6 757,985 - SMc03061 0.17 -3.0 757,990 + SMc03061 0.17 -3.0 758,023 + SMc03061 0.19 -2.9 758,024 - SMc03061 0.19 -0.7 758,041 + SMc03061 0.21 -2.8 758,065 - SMc03061 0.22 -3.2 758,188 + SMc03061 0.31 -2.9 758,188 + SMc03061 0.31 -3.0 758,188 + SMc03061 0.31 -2.6 758,188 + SMc03061 0.31 -4.2 758,188 + SMc03061 0.31 -3.0 758,188 + SMc03061 0.31 -1.8 758,189 - SMc03061 0.31 -4.0 758,189 - SMc03061 0.31 -3.4 758,224 + SMc03061 0.34 -2.8 758,225 - SMc03061 0.34 -1.6 758,225 - SMc03061 0.34 -3.8 758,225 - SMc03061 0.34 -4.4 758,227 - SMc03061 0.34 -3.6 758,254 + SMc03061 0.36 -0.6 758,297 - SMc03061 0.39 -4.3 758,326 + SMc03061 0.41 -3.0 758,492 - SMc03061 0.53 -2.1 758,492 - SMc03061 0.53 -2.6 758,516 + SMc03061 0.55 -1.3 758,517 - SMc03061 0.55 -0.9 758,668 + SMc03061 0.66 -2.1 758,668 + SMc03061 0.66 -3.5 758,669 - SMc03061 0.66 -4.4 758,669 - SMc03061 0.66 -2.8 758,669 - SMc03061 0.66 -2.8 758,746 + SMc03061 0.72 -3.5 758,746 + SMc03061 0.72 -2.2 758,746 + SMc03061 0.72 -2.2 758,746 + SMc03061 0.72 -4.8 758,747 - SMc03061 0.72 -3.2 758,747 - SMc03061 0.72 -1.8 758,782 - SMc03061 0.75 -1.0 758,914 + SMc03061 0.84 -4.4 758,939 - SMc03061 0.86 -1.9 759,105 - -2.6 759,212 - -2.1 759,212 - -2.7 759,212 - -3.0 759,212 - -2.9 759,312 + +1.3 759,313 - -2.8 759,330 + +1.6 759,330 + -0.5 759,331 - -0.2 759,589 - SMc03062 0.20 -4.5 759,589 - SMc03062 0.20 -0.3 759,598 - SMc03062 0.21 +0.7 759,670 - SMc03062 0.28 -3.2 759,806 + SMc03062 0.42 -3.1 759,879 + SMc03062 0.49 -5.4 759,880 - SMc03062 0.49 -1.6
Or see this region's nucleotide sequence