Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21472 and SM_b21473 are separated by 40 nucleotides SM_b21473 and SM_b21474 overlap by 4 nucleotides SM_b21474 and SM_b21475 are separated by 316 nucleotides SM_b21475 and SM_b21476 overlap by 1 nucleotides SM_b21476 and SM_b21477 overlap by 48 nucleotides
SM_b21472: SM_b21472 - hypothetical protein, at 1,398,286 to 1,398,825
_b21472
SM_b21473: SM_b21473 - hypothetical protein, at 1,398,866 to 1,399,300
_b21473
SM_b21474: SM_b21474 - 3-ketoacyl-ACP reductase, at 1,399,297 to 1,400,079
_b21474
SM_b21475: SM_b21475 - hypothetical protein, at 1,400,396 to 1,400,599
_b21475
SM_b21476: SM_b21476 - hypothetical protein, at 1,400,599 to 1,400,946
_b21476
SM_b21477: SM_b21477 - reverse transcriptasematurase, at 1,400,899 to 1,402,077
_b21477
Position (kb)
1399
1400
1401 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1398.308 kb on + strand at 1398.309 kb on - strand at 1398.438 kb on + strand, within SM_b21472 at 1398.452 kb on - strand, within SM_b21472 at 1398.488 kb on + strand, within SM_b21472 at 1398.489 kb on - strand, within SM_b21472 at 1398.489 kb on - strand, within SM_b21472 at 1398.495 kb on - strand at 1398.682 kb on + strand, within SM_b21472 at 1398.682 kb on + strand, within SM_b21472 at 1398.682 kb on + strand, within SM_b21472 at 1398.682 kb on + strand, within SM_b21472 at 1398.682 kb on + strand, within SM_b21472 at 1398.683 kb on - strand, within SM_b21472 at 1398.683 kb on - strand, within SM_b21472 at 1398.683 kb on - strand, within SM_b21472 at 1398.683 kb on - strand, within SM_b21472 at 1398.683 kb on - strand, within SM_b21472 at 1398.686 kb on + strand, within SM_b21472 at 1398.686 kb on + strand, within SM_b21472 at 1398.686 kb on + strand, within SM_b21472 at 1398.687 kb on - strand, within SM_b21472 at 1398.768 kb on + strand, within SM_b21472 at 1398.769 kb on - strand at 1398.928 kb on + strand, within SM_b21473 at 1398.928 kb on + strand, within SM_b21473 at 1398.944 kb on - strand, within SM_b21473 at 1399.246 kb on - strand, within SM_b21473 at 1399.445 kb on + strand, within SM_b21474 at 1399.445 kb on + strand, within SM_b21474 at 1399.445 kb on + strand, within SM_b21474 at 1399.445 kb on + strand, within SM_b21474 at 1399.446 kb on - strand, within SM_b21474 at 1399.446 kb on - strand, within SM_b21474 at 1399.446 kb on - strand, within SM_b21474 at 1399.446 kb on - strand, within SM_b21474 at 1399.530 kb on + strand, within SM_b21474 at 1399.544 kb on + strand, within SM_b21474 at 1399.544 kb on + strand, within SM_b21474 at 1399.545 kb on - strand, within SM_b21474 at 1399.765 kb on + strand, within SM_b21474 at 1399.824 kb on + strand, within SM_b21474 at 1399.950 kb on + strand, within SM_b21474 at 1399.951 kb on - strand, within SM_b21474 at 1399.951 kb on - strand, within SM_b21474 at 1400.120 kb on + strand at 1400.120 kb on + strand at 1400.165 kb on - strand at 1400.165 kb on - strand at 1400.166 kb on + strand at 1400.167 kb on - strand at 1400.167 kb on - strand at 1400.167 kb on - strand at 1400.171 kb on + strand at 1400.171 kb on + strand at 1400.171 kb on + strand at 1400.210 kb on + strand at 1400.416 kb on + strand at 1400.557 kb on - strand, within SM_b21475 at 1400.597 kb on + strand at 1400.597 kb on + strand at 1400.597 kb on + strand at 1400.657 kb on + strand, within SM_b21476 at 1400.658 kb on - strand, within SM_b21476 at 1400.697 kb on + strand, within SM_b21476 at 1400.698 kb on - strand, within SM_b21476 at 1400.715 kb on - strand, within SM_b21476
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 1,398,308 + +0.2 1,398,309 - +0.3 1,398,438 + SM_b21472 0.28 -0.2 1,398,452 - SM_b21472 0.31 +0.3 1,398,488 + SM_b21472 0.37 +0.0 1,398,489 - SM_b21472 0.38 -1.1 1,398,489 - SM_b21472 0.38 +0.9 1,398,495 - +2.9 1,398,682 + SM_b21472 0.73 +0.4 1,398,682 + SM_b21472 0.73 +0.6 1,398,682 + SM_b21472 0.73 -0.5 1,398,682 + SM_b21472 0.73 +0.1 1,398,682 + SM_b21472 0.73 +0.6 1,398,683 - SM_b21472 0.74 +0.3 1,398,683 - SM_b21472 0.74 +0.3 1,398,683 - SM_b21472 0.74 +0.3 1,398,683 - SM_b21472 0.74 +0.4 1,398,683 - SM_b21472 0.74 +0.3 1,398,686 + SM_b21472 0.74 -0.2 1,398,686 + SM_b21472 0.74 +0.0 1,398,686 + SM_b21472 0.74 +1.0 1,398,687 - SM_b21472 0.74 -0.0 1,398,768 + SM_b21472 0.89 +0.9 1,398,769 - -1.1 1,398,928 + SM_b21473 0.14 -0.5 1,398,928 + SM_b21473 0.14 +0.1 1,398,944 - SM_b21473 0.18 -0.4 1,399,246 - SM_b21473 0.87 +0.3 1,399,445 + SM_b21474 0.19 -0.5 1,399,445 + SM_b21474 0.19 -1.4 1,399,445 + SM_b21474 0.19 -1.7 1,399,445 + SM_b21474 0.19 -0.2 1,399,446 - SM_b21474 0.19 -0.1 1,399,446 - SM_b21474 0.19 -0.5 1,399,446 - SM_b21474 0.19 -0.8 1,399,446 - SM_b21474 0.19 -0.3 1,399,530 + SM_b21474 0.30 -0.3 1,399,544 + SM_b21474 0.32 -0.3 1,399,544 + SM_b21474 0.32 +0.2 1,399,545 - SM_b21474 0.32 +0.7 1,399,765 + SM_b21474 0.60 -0.2 1,399,824 + SM_b21474 0.67 -1.0 1,399,950 + SM_b21474 0.83 -0.4 1,399,951 - SM_b21474 0.84 +0.2 1,399,951 - SM_b21474 0.84 -2.3 1,400,120 + +0.0 1,400,120 + +0.5 1,400,165 - -1.3 1,400,165 - -0.6 1,400,166 + -1.3 1,400,167 - +0.2 1,400,167 - -0.1 1,400,167 - +0.9 1,400,171 + -0.5 1,400,171 + +0.3 1,400,171 + +0.7 1,400,210 + -0.2 1,400,416 + -0.4 1,400,557 - SM_b21475 0.79 -0.5 1,400,597 + +0.3 1,400,597 + +0.1 1,400,597 + -0.8 1,400,657 + SM_b21476 0.17 +0.6 1,400,658 - SM_b21476 0.17 +0.3 1,400,697 + SM_b21476 0.28 +0.7 1,400,698 - SM_b21476 0.28 +0.2 1,400,715 - SM_b21476 0.33 +0.0
Or see this region's nucleotide sequence