Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37450

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
3,879,815	+		RR42_RS37445	0.31	+1.9
3,879,815	+		RR42_RS37445	0.31	-0.7
3,880,016	+		RR42_RS37445	0.50	-0.7
3,880,017	-		RR42_RS37445	0.50	-1.0
3,880,082	+		RR42_RS37445	0.56	-0.2
3,880,094	+		RR42_RS37445	0.57	+0.3
3,880,094	+		RR42_RS37445	0.57	-1.6
3,880,094	+		RR42_RS37445	0.57	-1.9
3,880,094	+		RR42_RS37445	0.57	-0.6
3,880,095	-		RR42_RS37445	0.57	-1.9
3,880,100	+		RR42_RS37445	0.58	+0.5
3,880,101	-		RR42_RS37445	0.58	+0.6
3,880,202	+		RR42_RS37445	0.67	-0.4
3,880,241	+		RR42_RS37445	0.71	-0.3
3,880,242	-		RR42_RS37445	0.71	-0.7
3,880,430	+		RR42_RS37445	0.89	-1.2
3,880,552	-				+0.5
3,880,616	+				+0.6
3,880,616	+				+0.2
3,880,616	+				-0.1
3,880,616	+				+0.2
3,880,616	+				-0.5
3,880,616	+				-0.2
3,880,617	-				+2.5
3,880,617	-				-0.6
3,880,928	+		RR42_RS37450	0.15	+1.9
3,880,928	+		RR42_RS37450	0.15	+0.7
3,880,928	+		RR42_RS37450	0.15	-0.8
3,880,928	+		RR42_RS37450	0.15	+0.5
3,880,929	-		RR42_RS37450	0.15	-0.5
3,880,929	-		RR42_RS37450	0.15	+0.6
3,880,953	-		RR42_RS37450	0.18	-1.0
3,881,007	-		RR42_RS37450	0.24	+0.2
3,881,156	+		RR42_RS37450	0.40	-0.8
3,881,156	+		RR42_RS37450	0.40	-1.2
3,881,157	-		RR42_RS37450	0.41	+0.2
3,881,157	-		RR42_RS37450	0.41	+0.3
3,881,160	+		RR42_RS37450	0.41	-0.5
3,881,161	-		RR42_RS37450	0.41	+0.1
3,881,161	-		RR42_RS37450	0.41	+0.1
3,881,286	-		RR42_RS37450	0.55	-1.0
3,881,620	+				-0.6
3,881,620	+				-0.7
3,881,620	+				+0.2
3,881,620	+				+0.3
3,881,620	+				+1.4
3,881,621	-				-1.3
3,881,621	-				+0.5
3,881,621	-				-0.9
3,881,621	-				-0.1
3,881,633	+				+0.4
3,881,633	+				+0.9
3,881,634	-				+1.2
3,881,634	-				-0.3
3,881,796	+				-1.0
3,881,796	+				-0.6
3,881,796	+				-0.4
3,881,797	-				+0.0
3,882,046	-		RR42_RS37455	0.67	-0.3
3,882,210	-				+3.9
3,882,210	-				+1.9
3,882,252	+				+0.3
3,882,252	+				+0.5
3,882,252	+				+0.1
3,882,253	-				-0.3
3,882,253	-				-0.4
3,882,253	-				-0.4
3,882,517	+				+1.9
3,882,517	+				-0.9
3,882,518	-				+0.0
3,882,518	-				+0.9
3,882,589	+				+1.6
3,882,650	+				-0.0
3,882,650	+				-0.6
3,882,650	+				-0.3
3,882,651	-				-0.7
3,882,651	-				-1.1
3,882,651	-				+0.4