Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35565

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
3,430,756	+		RR42_RS35555	0.19	-0.9
3,430,756	+		RR42_RS35555	0.19	+0.9
3,430,756	+		RR42_RS35555	0.19	-0.0
3,430,757	-		RR42_RS35555	0.19	-1.2
3,430,757	-		RR42_RS35555	0.19	-1.2
3,430,757	-		RR42_RS35555	0.19	-1.0
3,430,820	-		RR42_RS35555	0.43	-1.1
3,430,844	-		RR42_RS35555	0.52	+2.0
3,430,847	+		RR42_RS35555	0.53	-2.1
3,430,847	+		RR42_RS35555	0.53	-0.8
3,430,847	+				+0.7
3,430,847	+		RR42_RS35555	0.53	-0.4
3,430,847	+		RR42_RS35555	0.53	+0.1
3,430,848	-		RR42_RS35555	0.54	+0.1
3,430,848	-		RR42_RS35555	0.54	-0.1
3,430,848	-		RR42_RS35555	0.54	+0.4
3,430,873	+		RR42_RS35555	0.63	-0.3
3,430,922	+		RR42_RS35555	0.82	-1.2
3,430,930	+		RR42_RS35555	0.85	+0.2
3,430,930	+		RR42_RS35555	0.85	+0.3
3,430,999	+				-0.3
3,430,999	+				-0.0
3,431,071	+				+0.5
3,431,072	-				+0.7
3,431,073	+				-0.6
3,431,073	+				+0.5
3,431,236	+				+0.4
3,431,236	+				-0.1
3,431,249	-				+2.3
3,431,249	-				+0.4
3,431,249	-				-0.1
3,431,250	+				+0.1
3,431,282	+		RR42_RS35560	0.21	-0.3
3,431,283	-		RR42_RS35560	0.22	-1.2
3,431,283	-		RR42_RS35560	0.22	-0.2
3,431,312	+		RR42_RS35560	0.35	-0.4
3,431,312	+		RR42_RS35560	0.35	+0.2
3,431,312	+		RR42_RS35560	0.35	-0.6
3,431,313	-		RR42_RS35560	0.36	+0.5
3,431,313	-		RR42_RS35560	0.36	-0.1
3,431,342	+		RR42_RS35560	0.49	+0.4
3,431,342	+		RR42_RS35560	0.49	-0.3
3,431,342	+		RR42_RS35560	0.49	+2.7
3,431,342	+		RR42_RS35560	0.49	+2.7
3,431,342	+		RR42_RS35560	0.49	+0.5
3,431,342	+		RR42_RS35560	0.49	-1.2
3,431,343	-		RR42_RS35560	0.50	-0.5
3,431,343	-		RR42_RS35560	0.50	-0.3
3,431,343	-		RR42_RS35560	0.50	+1.7
3,431,359	+		RR42_RS35560	0.57	+0.0
3,431,473	-				+0.4
3,431,473	-				+0.5
3,431,473	-				+0.7
3,431,473	-				+0.6
3,431,475	+				+0.1
3,431,475	+				-0.4
3,431,475	+				-0.4
3,431,476	-				-0.3
3,431,476	-				+0.3
3,431,480	+				-0.8
3,431,481	-				-0.3
3,431,488	+				-0.1
3,431,494	+				-1.0
3,431,544	+				+0.2
3,431,580	+				+0.5
3,431,620	-				-0.4
3,431,620	-				+0.2
3,431,620	-				+0.5
3,431,666	+				-0.1
3,431,667	-				+1.0
3,431,695	-				+0.4
3,431,727	+				+0.1
3,431,727	+				-0.8
3,431,731	+				-0.1
3,431,732	-				-0.1
3,431,808	-				-0.8
3,431,858	+		RR42_RS35565	0.15	+0.0
3,431,859	-		RR42_RS35565	0.15	-0.6
3,431,868	+		RR42_RS35565	0.16	+0.2
3,432,015	+		RR42_RS35565	0.29	+0.9
3,432,015	+		RR42_RS35565	0.29	-0.4
3,432,016	-		RR42_RS35565	0.29	+0.2
3,432,016	-		RR42_RS35565	0.29	+0.4
3,432,085	-		RR42_RS35565	0.36	+1.1
3,432,085	-		RR42_RS35565	0.36	-0.9
3,432,188	+		RR42_RS35565	0.46	+1.0
3,432,189	-		RR42_RS35565	0.46	+1.0
3,432,189	-		RR42_RS35565	0.46	+0.4
3,432,189	-		RR42_RS35565	0.46	-0.2
3,432,189	-		RR42_RS35565	0.46	+0.4
3,432,203	+		RR42_RS35565	0.47	+0.4
3,432,204	-		RR42_RS35565	0.47	+0.5
3,432,240	-		RR42_RS35565	0.50	+0.5
3,432,351	-		RR42_RS35565	0.61	+0.7
3,432,356	+		RR42_RS35565	0.61	+1.4
3,432,364	-		RR42_RS35565	0.62	-0.0
3,432,364	-		RR42_RS35565	0.62	-0.1
3,432,485	-		RR42_RS35565	0.73	+0.5
3,432,488	-		RR42_RS35565	0.74	+0.6
3,432,547	+		RR42_RS35565	0.79	+0.7
3,432,562	+		RR42_RS35565	0.81	+0.4
3,432,562	+		RR42_RS35565	0.81	-0.2
3,432,563	-		RR42_RS35565	0.81	+0.2
3,432,612	-		RR42_RS35565	0.85	-0.7
3,432,631	-		RR42_RS35565	0.87	+0.3
3,432,676	+				-1.3
3,432,684	-				-0.6
3,432,831	-				+2.7
3,432,831	-				-0.0
3,432,867	+				-1.1
3,432,871	-				-0.7
3,432,893	+				+0.1
3,432,893	+				-0.3
3,432,966	-				-0.3
3,432,995	-				+1.7
3,433,012	+				+0.5
3,433,013	-				-0.3
3,433,057	+				+0.2
3,433,076	-				-0.1
3,433,076	-				-0.4
3,433,118	-				-1.2
3,433,145	-				-0.3
3,433,176	-				+0.3
3,433,319	-				-0.2
3,433,338	+				+0.3
3,433,339	-				-0.5
3,433,399	+				+1.1
3,433,400	-				-0.6
3,433,400	-				-0.0
3,433,462	+				+0.3
3,433,462	+				+0.0
3,433,462	+				+1.6
3,433,463	-				+1.7
3,433,466	-				-0.0
3,433,505	-				-0.3
3,433,561	+				-0.2
3,433,576	+				+1.7