Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35430

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
3,400,543	-		RR42_RS35425	0.24	-0.5
3,400,601	+		RR42_RS35425	0.35	-0.4
3,400,777	+		RR42_RS35425	0.68	+0.5
3,400,778	-		RR42_RS35425	0.69	-0.4
3,400,810	+		RR42_RS35425	0.75	-1.4
3,400,810	+		RR42_RS35425	0.75	-0.4
3,400,929	+				-0.9
3,401,026	+				+0.7
3,401,026	+				+0.4
3,401,065	-				+0.5
3,401,120	+				-0.4
3,401,225	+				+0.3
3,401,225	+				-0.7
3,401,225	+				-0.9
3,401,226	-				+0.1
3,401,234	+				-1.0
3,401,234	+				+0.5
3,401,235	-				-0.3
3,401,235	-				+0.4
3,401,270	-				-0.8
3,401,279	-				+0.9
3,401,486	+				-0.6
3,401,487	-				+0.2
3,401,534	+				-0.4
3,401,534	+				+1.1
3,401,535	-				+0.0
3,401,535	-				-0.0
3,401,545	+				+0.0
3,401,594	-		RR42_RS35430	0.18	-2.0
3,401,594	-		RR42_RS35430	0.18	-0.5
3,401,622	+		RR42_RS35430	0.25	+0.2
3,401,623	-		RR42_RS35430	0.25	+0.0
3,401,623	-		RR42_RS35430	0.25	+0.5
3,401,623	-		RR42_RS35430	0.25	-1.4
3,401,625	+		RR42_RS35430	0.26	-1.5
3,401,625	+		RR42_RS35430	0.26	-0.7
3,401,626	-		RR42_RS35430	0.26	+1.3
3,401,714	+		RR42_RS35430	0.49	-1.3
3,401,714	+		RR42_RS35430	0.49	+1.2
3,401,718	+		RR42_RS35430	0.50	+1.7
3,401,719	-		RR42_RS35430	0.50	+0.1
3,401,719	-		RR42_RS35430	0.50	+0.1
3,401,764	+		RR42_RS35430	0.62	+0.1
3,401,780	+		RR42_RS35430	0.66	+0.8
3,401,780	+		RR42_RS35430	0.66	+0.4
3,401,780	+		RR42_RS35430	0.66	+0.2
3,401,780	+		RR42_RS35430	0.66	+0.6
3,401,781	-		RR42_RS35430	0.67	+0.7
3,401,781	-		RR42_RS35430	0.67	+0.0
3,401,781	-		RR42_RS35430	0.67	-0.7
3,401,831	-		RR42_RS35430	0.80	+0.9
3,401,859	-		RR42_RS35430	0.87	+1.3
3,401,859	-		RR42_RS35430	0.87	-0.2
3,401,871	+				+1.0
3,401,872	-				-0.7
3,402,155	-				-0.6
3,402,221	+				+1.4
3,402,221	+				-1.7
3,402,221	+				-0.2
3,402,221	+				-0.0
3,402,221	+				-0.7
3,402,222	-				+0.0
3,402,222	-				-0.4
3,402,222	-				+0.3
3,402,225	+				+0.9
3,402,226	-				+0.1
3,402,226	-				-0.4
3,402,326	+				-0.7
3,402,326	+				+0.5
3,402,327	-				+1.2
3,402,349	-				+1.7
3,402,381	+				-2.4
3,402,382	-				+1.0
3,402,382	-				-0.7
3,402,443	+				+0.1
3,402,443	+				+0.0
3,402,443	+				-1.2
3,402,443	+				+0.1
3,402,445	+				+0.5
3,402,445	+				-1.4
3,402,445	+				-1.0
3,402,446	-				+0.5
3,402,446	-				+1.7
3,402,446	-				+0.0
3,402,449	+				-1.9
3,402,450	-				-0.0
3,402,450	-				-0.6
3,402,450	-				+1.3
3,402,450	-				+0.4
3,402,450	-				-0.1
3,402,450	-				-0.7
3,402,564	+				-0.9
3,402,564	+				-0.7
3,402,565	-				+0.2
3,402,577	+				-0.1
3,402,578	-				+0.6
3,402,590	-				-0.8
3,402,729	-				+0.2
3,402,729	-				-0.1
3,402,748	+				+0.6
3,402,815	-		RR42_RS35435	0.14	-0.9
3,402,835	+		RR42_RS35435	0.15	+0.7