Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35145

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
3,335,814	+		RR42_RS35135	0.76	-0.5
3,336,066	+				-0.4
3,336,105	-				+0.0
3,336,123	+				-0.2
3,336,259	+		RR42_RS35140	0.26	+0.4
3,336,260	-		RR42_RS35140	0.26	-0.2
3,336,260	-		RR42_RS35140	0.26	-0.7
3,336,338	-		RR42_RS35140	0.43	-0.3
3,336,565	+				-0.3
3,336,635	+				+0.2
3,336,635	+				+0.7
3,336,636	-				+0.4
3,336,636	-				-0.2
3,336,636	-				+0.2
3,336,711	+				-0.2
3,336,798	-		RR42_RS35145	0.12	+0.3
3,336,798	-		RR42_RS35145	0.12	+0.3
3,336,798	-		RR42_RS35145	0.12	-1.2
3,336,860	+		RR42_RS35145	0.16	-1.2
3,336,860	+		RR42_RS35145	0.16	-0.1
3,336,861	-		RR42_RS35145	0.16	+0.7
3,336,861	-		RR42_RS35145	0.16	-0.2
3,336,863	+		RR42_RS35145	0.16	-0.5
3,336,864	-		RR42_RS35145	0.16	+0.1
3,336,864	-		RR42_RS35145	0.16	+1.3
3,336,864	-		RR42_RS35145	0.16	+0.9
3,336,864	-		RR42_RS35145	0.16	+0.1
3,336,947	+		RR42_RS35145	0.22	-2.9
3,336,947	+		RR42_RS35145	0.22	-0.0
3,336,947	+		RR42_RS35145	0.22	-0.4
3,336,948	-		RR42_RS35145	0.22	-0.2
3,336,948	-		RR42_RS35145	0.22	+0.5
3,336,948	-		RR42_RS35145	0.22	-1.0
3,336,948	-		RR42_RS35145	0.22	-1.2
3,336,948	-		RR42_RS35145	0.22	-2.3
3,336,983	+		RR42_RS35145	0.24	-0.8
3,336,983	+		RR42_RS35145	0.24	-0.1
3,336,984	-		RR42_RS35145	0.24	-1.1
3,336,984	-		RR42_RS35145	0.24	-0.8
3,337,071	+		RR42_RS35145	0.30	+0.0
3,337,670	+		RR42_RS35145	0.68	-0.1
3,337,767	+		RR42_RS35145	0.75	-1.7
3,337,768	-		RR42_RS35145	0.75	-1.4
3,337,768	-		RR42_RS35145	0.75	+0.5
3,338,106	-				-0.2
3,338,156	+				+0.4
3,338,156	+				-0.3
3,338,157	-				+0.7
3,338,337	+				-1.2
3,338,337	+				-0.2
3,338,338	-				+1.0
3,338,365	-				+0.1
3,338,496	+		RR42_RS35150	0.16	+0.8
3,338,497	-		RR42_RS35150	0.16	+0.6
3,338,497	-		RR42_RS35150	0.16	-0.6
3,338,497	-		RR42_RS35150	0.16	-0.6
3,338,497	-		RR42_RS35150	0.16	+0.5
3,338,548	-		RR42_RS35150	0.20	-0.4
3,338,553	+		RR42_RS35150	0.20	+0.6
3,338,553	+		RR42_RS35150	0.20	-0.6
3,338,554	-		RR42_RS35150	0.20	-0.2
3,338,556	-		RR42_RS35150	0.20	-1.3
3,338,656	+		RR42_RS35150	0.26	+0.2
3,338,656	+		RR42_RS35150	0.26	+0.0
3,338,782	-		RR42_RS35150	0.34	-0.6
3,338,838	+		RR42_RS35150	0.38	-0.4
3,338,856	+		RR42_RS35150	0.39	+1.7
3,338,856	+		RR42_RS35150	0.39	-0.3
3,338,857	-		RR42_RS35150	0.39	-0.3
3,338,857	-		RR42_RS35150	0.39	+0.1
3,338,916	+		RR42_RS35150	0.43	-0.9
3,338,916	+		RR42_RS35150	0.43	-0.8
3,338,916	+		RR42_RS35150	0.43	-0.6
3,338,916	+		RR42_RS35150	0.43	-1.8
3,338,917	-		RR42_RS35150	0.43	-0.7
3,339,030	+		RR42_RS35150	0.50	-0.7
3,339,031	-		RR42_RS35150	0.50	+1.2