Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34565

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
3,196,408	+		RR42_RS34560	0.24	-0.2
3,196,498	+		RR42_RS34560	0.35	+0.4
3,196,498	+		RR42_RS34560	0.35	+0.4
3,196,498	+		RR42_RS34560	0.35	+0.4
3,196,499	-		RR42_RS34560	0.35	-0.4
3,196,499	-		RR42_RS34560	0.35	+0.0
3,196,499	-				-0.4
3,196,499	-		RR42_RS34560	0.35	+0.5
3,196,499	-		RR42_RS34560	0.35	+1.6
3,196,499	-		RR42_RS34560	0.35	+0.2
3,196,502	+		RR42_RS34560	0.35	-0.6
3,196,502	+		RR42_RS34560	0.35	-0.6
3,196,583	+		RR42_RS34560	0.44	+1.6
3,196,651	+		RR42_RS34560	0.52	+0.1
3,196,651	+		RR42_RS34560	0.52	+1.0
3,196,940	-		RR42_RS34560	0.85	-1.0
3,196,979	-		RR42_RS34560	0.90	+0.1
3,197,129	+				-2.1
3,197,340	-		RR42_RS34565	0.16	-0.4
3,197,340	-		RR42_RS34565	0.16	-0.4
3,197,397	-		RR42_RS34565	0.29	-0.9
3,197,411	+		RR42_RS34565	0.32	-0.8
3,197,412	-		RR42_RS34565	0.32	+1.6
3,197,680	-				+0.1
3,197,712	+				-0.5
3,197,748	-				-0.1
3,197,768	+				+1.6
3,197,787	+				+0.1
3,197,787	+				-0.6
3,197,788	-				-1.0
3,197,788	-				+0.8
3,197,953	+				-0.3
3,198,001	+				-0.2
3,198,001	+				-0.4
3,198,001	+				+0.1
3,198,001	+				+1.0
3,198,002	-				+0.0
3,198,041	-				-0.2
3,198,125	+				-0.1
3,198,149	-				+0.0
3,198,223	+				-1.2
3,198,231	-				-0.2
3,198,273	+		RR42_RS34570	0.26	-1.2
3,198,273	+		RR42_RS34570	0.26	+0.2
3,198,506	+				-2.2
3,198,523	-				+1.9
3,198,541	+				-0.3
3,198,541	+				+0.5
3,198,542	-				+0.2
3,198,542	-				-1.0
3,198,542	-				+0.2
3,198,542	-				-0.4
3,198,542	-				+0.3
3,198,545	+				+0.6
3,198,545	+				-1.9
3,198,545	+				-0.2
3,198,546	-				+1.0
3,198,546	-				-0.5
3,198,546	-				+1.0
3,198,546	-				+0.7
3,198,546	-				-1.2
3,198,546	-				-0.6
3,198,546	-				-0.1
3,198,577	-				+0.8
3,198,577	-				-0.9
3,198,577	-				+1.2
3,198,581	+				+1.3
3,198,582	-				+0.4
3,198,582	-				-0.6
3,198,584	+				-0.7
3,198,679	+				+0.7