Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34320

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
3,126,679	+		RR42_RS34315	0.18	+1.6
3,126,679	+		RR42_RS34315	0.18	+0.2
3,126,679	+		RR42_RS34315	0.18	-0.6
3,126,680	-		RR42_RS34315	0.18	-1.9
3,126,680	-		RR42_RS34315	0.18	-0.2
3,126,727	+		RR42_RS34315	0.24	+0.0
3,126,809	-		RR42_RS34315	0.35	+0.9
3,126,914	-		RR42_RS34315	0.49	+0.3
3,126,955	+		RR42_RS34315	0.54	+1.0
3,126,961	+		RR42_RS34315	0.55	-0.7
3,126,961	+		RR42_RS34315	0.55	-0.0
3,126,962	-		RR42_RS34315	0.55	+1.2
3,127,128	-		RR42_RS34315	0.77	-1.7
3,127,128	-		RR42_RS34315	0.77	-0.4
3,127,128	-		RR42_RS34315	0.77	+0.3
3,127,208	+		RR42_RS34315	0.87	+0.0
3,127,209	-		RR42_RS34315	0.87	+0.5
3,127,209	-		RR42_RS34315	0.87	+0.7
3,127,209	-		RR42_RS34315	0.87	+0.7
3,127,210	+		RR42_RS34315	0.88	-0.6
3,127,210	+		RR42_RS34315	0.88	+0.4
3,127,745	-		RR42_RS34320	0.32	+0.0
3,127,745	-		RR42_RS34320	0.32	+0.8
3,127,745	-		RR42_RS34320	0.32	+0.5
3,127,855	+		RR42_RS34320	0.46	+0.0
3,127,855	+		RR42_RS34320	0.46	-0.0
3,127,855	+		RR42_RS34320	0.46	-0.1
3,127,856	-		RR42_RS34320	0.46	-0.1
3,127,856	-		RR42_RS34320	0.46	-0.4
3,127,856	-		RR42_RS34320	0.46	+0.2
3,127,924	+		RR42_RS34320	0.55	-0.2
3,127,924	+		RR42_RS34320	0.55	+0.7
3,127,925	-		RR42_RS34320	0.55	-0.0
3,127,925	-		RR42_RS34320	0.55	+0.6
3,127,925	-		RR42_RS34320	0.55	+0.9
3,127,948	+		RR42_RS34320	0.58	-0.4
3,128,014	-		RR42_RS34320	0.66	+1.6
3,128,014	-		RR42_RS34320	0.66	+1.2
3,128,292	-				-0.6
3,128,445	+		RR42_RS34325	0.27	-0.9
3,128,445	+		RR42_RS34325	0.27	+0.1
3,128,490	+		RR42_RS34325	0.41	+0.6
3,128,490	+		RR42_RS34325	0.41	+0.5
3,128,490	+		RR42_RS34325	0.41	-0.1
3,128,491	-		RR42_RS34325	0.41	+1.3
3,128,541	+		RR42_RS34325	0.58	+1.0
3,128,542	-		RR42_RS34325	0.58	+0.1
3,128,652	+				-0.1
3,128,652	+				-0.4
3,128,652	+				+0.6
3,128,653	-				+1.2
3,128,653	-				+0.1
3,128,742	+				+0.8
3,128,743	-				+1.0
3,128,782	-				+0.4
3,128,831	+				+1.6
3,128,831	+				+1.1
3,128,832	-				+0.3
3,128,832	-				-0.2
3,128,832	-				+0.8
3,128,832	-				+0.4
3,128,832	-				+0.7
3,128,832	-				+0.6
3,128,916	+				+0.2
3,128,916	+				-0.2
3,128,917	-				-1.0
3,128,917	-				-0.8
3,129,001	+				+0.4
3,129,001	+				-0.0
3,129,002	-				+0.9
3,129,002	-				+3.2
3,129,002	-				+0.0
3,129,002	-				+0.1
3,129,016	+				+0.1
3,129,016	+				+0.1
3,129,016	+				+2.6
3,129,017	-				+0.1
3,129,118	+		RR42_RS34330	0.28	+0.3
3,129,119	-		RR42_RS34330	0.28	-0.9
3,129,119	-		RR42_RS34330	0.28	+0.1