Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34130

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
3,084,421	-		RR42_RS34125	0.30	+0.3
3,084,678	+		RR42_RS34125	0.55	+0.6
3,084,678	+		RR42_RS34125	0.55	+0.6
3,084,715	-		RR42_RS34125	0.59	+0.3
3,084,715	-		RR42_RS34125	0.59	-0.0
3,084,715	-		RR42_RS34125	0.59	+1.4
3,084,854	+		RR42_RS34125	0.72	-0.0
3,084,855	-		RR42_RS34125	0.72	+0.7
3,084,855	-		RR42_RS34125	0.72	-0.0
3,084,869	-		RR42_RS34125	0.74	+0.1
3,084,950	+		RR42_RS34125	0.82	-0.4
3,084,951	-		RR42_RS34125	0.82	-1.5
3,085,080	+				-0.0
3,085,080	+				-0.2
3,085,080	+				-0.0
3,085,080	+				-0.2
3,085,133	+				+1.3
3,085,134	-				+0.4
3,085,134	-				+1.7
3,085,165	+				+0.1
3,085,165	+				-0.1
3,085,166	-				-0.2
3,085,166	-				-0.0
3,085,178	+				+0.4
3,085,186	+				-0.4
3,085,187	-				-0.3
3,085,401	+		RR42_RS34130	0.18	+0.6
3,085,590	+		RR42_RS34130	0.39	-0.6
3,085,742	+		RR42_RS34130	0.55	+0.2
3,085,743	-		RR42_RS34130	0.55	+1.0
3,085,743	-		RR42_RS34130	0.55	-0.0
3,085,752	+		RR42_RS34130	0.56	+2.6
3,085,753	-		RR42_RS34130	0.56	+0.8
3,085,753	-		RR42_RS34130	0.56	+0.8
3,085,753	-		RR42_RS34130	0.56	-0.2
3,085,805	+		RR42_RS34130	0.62	-0.0
3,085,805	+		RR42_RS34130	0.62	-1.4
3,085,806	-		RR42_RS34130	0.62	-0.7
3,085,806	-		RR42_RS34130	0.62	+1.0
3,085,808	-		RR42_RS34130	0.62	-0.4
3,085,843	+		RR42_RS34130	0.66	+0.3
3,085,949	-		RR42_RS34130	0.77	-0.9
3,085,996	-		RR42_RS34130	0.82	-1.3
3,086,001	+		RR42_RS34130	0.83	-1.7
3,086,001	+		RR42_RS34130	0.83	-0.0
3,086,016	-		RR42_RS34130	0.85	-1.1
3,086,130	-				+1.0
3,086,130	-				-0.3
3,086,266	+				-0.0
3,086,266	+				+1.6
3,086,266	+				-0.4
3,086,390	-		RR42_RS34135	0.24	+1.3
3,086,440	+		RR42_RS34135	0.37	+0.2
3,086,443	-		RR42_RS34135	0.38	-0.4
3,086,446	+		RR42_RS34135	0.38	+0.4
3,086,446	+		RR42_RS34135	0.38	+1.0
3,086,482	+		RR42_RS34135	0.48	+1.4
3,086,482	+		RR42_RS34135	0.48	-0.0
3,086,483	-		RR42_RS34135	0.48	-1.1
3,086,483	-		RR42_RS34135	0.48	-0.2
3,086,483	-		RR42_RS34135	0.48	-0.4
3,086,483	-		RR42_RS34135	0.48	+0.0
3,086,483	-		RR42_RS34135	0.48	-0.5
3,086,501	+		RR42_RS34135	0.53	+1.8
3,086,501	+		RR42_RS34135	0.53	-0.1
3,086,618	-		RR42_RS34135	0.84	+0.1
3,086,667	+				+0.5
3,086,668	-				+0.2
3,086,669	+				-0.4
3,086,669	+				-1.0
3,086,670	-				-0.8
3,086,670	-				-1.4
3,086,757	+				+1.0
3,086,758	-				-0.2
3,086,758	-				-0.0
3,086,773	+				-0.5
3,086,773	+				-0.1
3,086,773	+				-0.7
3,086,774	-				-0.1
3,086,774	-				-0.9
3,086,774	-				+0.2
3,086,774	-				-1.0
3,086,775	+				+1.0
3,086,775	+				-0.1
3,086,775	+				-0.0
3,086,776	-				+0.6
3,086,776	-				-0.5
3,086,776	-				-0.0
3,086,776	-				+1.6
3,086,776	-				-1.0
3,086,779	+				+0.1
3,086,780	-				-1.1
3,086,862	+				-0.5
3,086,869	-				+0.1
3,086,894	+				-0.4
3,086,895	-				+0.3
3,086,895	-				-0.5
3,086,899	+				-0.7
3,086,930	+				+0.9
3,086,941	+				-0.3
3,087,052	+		RR42_RS34140	0.14	+0.8
3,087,095	+		RR42_RS34140	0.34	-0.7
3,087,096	-		RR42_RS34140	0.35	-0.1
3,087,106	+		RR42_RS34140	0.39	-0.0
3,087,106	+		RR42_RS34140	0.39	-0.4
3,087,107	-		RR42_RS34140	0.40	-0.4
3,087,127	+		RR42_RS34140	0.49	+1.8
3,087,128	-		RR42_RS34140	0.50	-0.2