Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33165

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
2,844,047	+		RR42_RS33155	0.36	+0.4
2,844,120	+		RR42_RS33155	0.77	+0.7
2,844,120	+		RR42_RS33155	0.77	-1.0
2,844,120	+		RR42_RS33155	0.77	-0.6
2,844,120	+		RR42_RS33155	0.77	-0.6
2,844,121	-		RR42_RS33155	0.77	-1.6
2,844,121	-		RR42_RS33155	0.77	-1.6
2,844,121	-		RR42_RS33155	0.77	-1.3
2,844,121	-		RR42_RS33155	0.77	+0.9
2,844,159	+				-0.2
2,844,219	+				-1.3
2,844,220	-				-0.7
2,844,220	-				-0.4
2,844,222	+				-0.6
2,844,300	+				+0.3
2,844,300	+				+1.2
2,844,301	-				+0.3
2,844,301	-				-0.5
2,844,301	-				-0.2
2,844,359	+		RR42_RS33160	0.18	-0.2
2,844,359	+		RR42_RS33160	0.18	-0.9
2,844,369	+		RR42_RS33160	0.20	-2.5
2,844,370	-		RR42_RS33160	0.20	-0.3
2,844,411	+		RR42_RS33160	0.27	-0.3
2,844,426	+		RR42_RS33160	0.29	+1.1
2,844,426	+		RR42_RS33160	0.29	-1.0
2,844,426	+		RR42_RS33160	0.29	-1.3
2,844,427	-		RR42_RS33160	0.30	-0.9
2,844,575	+		RR42_RS33160	0.55	-0.2
2,844,901	-				-0.2
2,844,901	-				-0.1
2,844,910	+				-0.0
2,844,967	+				-0.3
2,844,967	+				+0.3
2,844,971	+				-0.1
2,844,971	+				+1.1
2,844,971	+				-0.0
2,844,972	-				+0.8
2,844,972	-				-0.7
2,844,972	-				+0.9
2,844,972	-				-0.8
2,844,972	-				-0.6
2,845,026	+				-0.8
2,845,026	+				+0.7
2,845,026	+				-0.2
2,845,026	+				+0.1
2,845,027	-				+0.5
2,845,031	+				-0.2
2,845,031	+				-0.8
2,845,032	-				+0.7
2,845,073	+				+0.1
2,845,073	+				-0.3
2,845,074	-				-1.3
2,845,292	+		RR42_RS33165	0.31	-1.8
2,845,523	+		RR42_RS33165	0.59	+0.4
2,845,721	+		RR42_RS33165	0.83	-1.1
2,845,722	-		RR42_RS33165	0.83	-0.3
2,845,725	+		RR42_RS33165	0.83	+0.2
2,845,725	+		RR42_RS33165	0.83	+0.0
2,845,725	+		RR42_RS33165	0.83	-0.2
2,845,725	+		RR42_RS33165	0.83	+0.9
2,845,725	+		RR42_RS33165	0.83	-3.0
2,845,726	-		RR42_RS33165	0.83	+3.1
2,845,726	-		RR42_RS33165	0.83	+0.6
2,845,726	-		RR42_RS33165	0.83	+0.6
2,845,726	-		RR42_RS33165	0.83	-0.3
2,845,726	-		RR42_RS33165	0.83	-0.8
2,845,726	-		RR42_RS33165	0.83	-0.4
2,845,726	-		RR42_RS33165	0.83	+0.1
2,845,726	-		RR42_RS33165	0.83	-0.8
2,845,956	+				+0.6
2,845,956	+				-0.0
2,845,956	+				+0.1
2,845,957	-				+0.0
2,846,034	-				+1.1
2,846,041	+				+0.1
2,846,042	-				-0.7
2,846,049	+				-0.8
2,846,148	+				+1.6
2,846,148	+				-0.7
2,846,148	+				-0.7
2,846,148	+				-0.3
2,846,149	-				-0.4
2,846,149	-				+0.2
2,846,149	-				-0.0
2,846,149	-				+0.4
2,846,190	-				-0.4
2,846,190	-				-1.6
2,846,190	-				+1.1
2,846,250	+				-0.4
2,846,250	+				+0.6
2,846,250	+				+0.6
2,846,251	-				+1.0
2,846,251	-				-0.3
2,846,251	-				-0.0
2,846,253	+				+0.2
2,846,271	+				+1.1
2,846,272	-				+0.1
2,846,272	-				+1.0
2,846,274	+				-0.4
2,846,275	-				+0.1
2,846,275	-				+0.0
2,846,283	+				+0.8
2,846,284	-				+0.7
2,846,284	-				+0.1
2,846,337	-				+1.2
2,846,353	+				+0.7
2,846,433	+				-0.5
2,846,460	+				-0.7
2,846,460	+				-1.9
2,846,461	-				+0.2
2,846,500	-				+0.2
2,846,503	-				+0.4
2,846,535	+				-0.4
2,846,535	+				+0.7
2,846,565	+				-0.2
2,846,565	+				+0.9
2,846,616	+		RR42_RS33170	0.14	-0.2
2,846,639	-		RR42_RS33170	0.16	-0.8
2,846,639	-		RR42_RS33170	0.16	-0.5
2,846,639	-		RR42_RS33170	0.16	-0.2
2,846,639	-		RR42_RS33170	0.16	-0.6
2,846,745	+		RR42_RS33170	0.25	-1.8
2,846,746	-		RR42_RS33170	0.26	-0.8
2,846,746	-		RR42_RS33170	0.26	-0.8
2,846,790	+		RR42_RS33170	0.30	+0.4
2,846,791	-		RR42_RS33170	0.30	+0.6
2,846,791	-		RR42_RS33170	0.30	+0.2
2,846,791	-		RR42_RS33170	0.30	-0.4