Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30605

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
2,243,670	-		RR42_RS30600	0.85	-0.6
2,243,670	-		RR42_RS30600	0.85	+0.0
2,243,670	-		RR42_RS30600	0.85	+2.2
2,243,846	+				-0.7
2,243,847	-				-1.8
2,244,004	+				+0.2
2,244,005	-				-0.9
2,244,187	-				-0.8
2,244,190	+				+0.6
2,244,190	+				+1.1
2,244,190	+				-0.1
2,244,190	+				-0.3
2,244,190	+				-0.0
2,244,190	+				-2.2
2,244,190	+				-1.0
2,244,190	+				+0.0
2,244,191	-				-0.8
2,244,191	-				+2.8
2,244,191	-				-0.6
2,244,191	-				+0.5
2,244,191	-				+0.1
2,244,191	-				-0.1
2,244,191	-				-1.2
2,244,191	-				+0.5
2,244,191	-				-0.3
2,244,191	-				+0.7
2,244,791	+		RR42_RS30605	0.55	+0.4
2,244,791	+		RR42_RS30605	0.55	-0.3
2,244,791	+		RR42_RS30605	0.55	+0.3
2,244,792	-		RR42_RS30605	0.55	-0.2
2,245,040	+		RR42_RS30605	0.82	-3.0
2,245,040	+		RR42_RS30605	0.82	+1.7
2,245,041	-		RR42_RS30605	0.82	+0.5
2,245,065	+		RR42_RS30605	0.84	-0.5
2,245,065	+		RR42_RS30605	0.84	+0.7
2,245,065	+		RR42_RS30605	0.84	-1.2
2,245,066	-		RR42_RS30605	0.84	-1.2
2,245,276	-				-0.2
2,245,336	+				-0.8
2,245,337	-				-0.1
2,245,487	+		RR42_RS30610	0.14	+1.1
2,245,487	+		RR42_RS30610	0.14	-0.7
2,245,610	+		RR42_RS30610	0.24	+0.6
2,245,652	+		RR42_RS30610	0.27	-1.5
2,245,653	-		RR42_RS30610	0.27	-0.8
2,245,715	+		RR42_RS30610	0.33	-0.8
2,245,715	+		RR42_RS30610	0.33	+0.2
2,245,716	-		RR42_RS30610	0.33	-0.3
2,245,772	+		RR42_RS30610	0.37	+1.8
2,245,772	+		RR42_RS30610	0.37	-0.3
2,245,773	-		RR42_RS30610	0.37	+0.4
2,245,773	-		RR42_RS30610	0.37	-0.8
2,245,799	+		RR42_RS30610	0.39	-1.3
2,245,892	+		RR42_RS30610	0.47	-0.2
2,245,892	+		RR42_RS30610	0.47	+0.1
2,245,892	+		RR42_RS30610	0.47	-0.1
2,245,893	-		RR42_RS30610	0.47	-0.0
2,245,893	-		RR42_RS30610	0.47	-0.4
2,245,918	+		RR42_RS30610	0.49	+0.7
2,245,918	+		RR42_RS30610	0.49	-1.2
2,245,918	+		RR42_RS30610	0.49	+0.3
2,245,919	-		RR42_RS30610	0.49	-0.6
2,245,943	+		RR42_RS30610	0.51	-0.8
2,245,944	+		RR42_RS30610	0.51	-1.3
2,245,944	-		RR42_RS30610	0.51	-0.9
2,245,944	-		RR42_RS30610	0.51	+0.4
2,245,944	-		RR42_RS30610	0.51	+0.7
2,245,944	-		RR42_RS30610	0.51	-0.7
2,245,984	+		RR42_RS30610	0.55	-0.3
2,246,060	+		RR42_RS30610	0.61	-0.5
2,246,061	-		RR42_RS30610	0.61	-0.5
2,246,061	-		RR42_RS30610	0.61	-0.2
2,246,061	-		RR42_RS30610	0.61	+1.6