Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30020

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
2,100,471	-		RR42_RS30015	0.22	+0.4
2,100,471	-		RR42_RS30015	0.22	-0.6
2,100,563	-		RR42_RS30015	0.30	+0.0
2,100,663	+		RR42_RS30015	0.38	+0.2
2,100,663	+		RR42_RS30015	0.38	+0.4
2,100,664	-		RR42_RS30015	0.38	-0.2
2,100,664	-		RR42_RS30015	0.38	-0.2
2,100,686	+		RR42_RS30015	0.40	+0.3
2,100,755	-		RR42_RS30015	0.45	-0.7
2,100,755	-		RR42_RS30015	0.45	+0.6
2,100,755	-		RR42_RS30015	0.45	-1.1
2,100,929	+		RR42_RS30015	0.59	-1.0
2,100,929	+		RR42_RS30015	0.59	-2.2
2,100,930	-		RR42_RS30015	0.59	-0.4
2,100,930	-		RR42_RS30015	0.59	-0.7
2,100,930	-		RR42_RS30015	0.59	+0.1
2,100,930	-		RR42_RS30015	0.59	-1.1
2,100,935	+		RR42_RS30015	0.60	+0.2
2,100,935	+		RR42_RS30015	0.60	-0.4
2,100,935	+		RR42_RS30015	0.60	+1.2
2,100,935	+		RR42_RS30015	0.60	+0.6
2,100,936	-		RR42_RS30015	0.60	-0.6
2,100,936	-		RR42_RS30015	0.60	+0.8
2,100,936	-		RR42_RS30015	0.60	-1.0
2,100,936	-		RR42_RS30015	0.60	-0.5
2,100,953	-		RR42_RS30015	0.61	+0.1
2,100,963	+		RR42_RS30015	0.62	-0.1
2,101,112	-		RR42_RS30015	0.74	-0.6
2,101,150	+		RR42_RS30015	0.77	+0.4
2,101,151	-		RR42_RS30015	0.78	+0.4
2,101,151	-		RR42_RS30015	0.78	+2.4
2,101,182	+		RR42_RS30015	0.80	-0.3
2,101,183	-		RR42_RS30015	0.80	-0.9
2,101,317	+				+0.9
2,101,317	+				+0.1
2,101,318	-				-0.4
2,101,321	+				+0.0
2,101,321	+				-0.4
2,101,322	-				+0.1
2,101,354	+				-0.4
2,101,355	-				+0.2
2,101,355	-				-0.4
2,101,367	+				-1.6
2,101,401	+				-0.8
2,101,401	+				+0.3
2,101,402	-				+0.7
2,101,440	-				+0.1
2,101,554	+		RR42_RS30020	0.58	-0.0
2,101,554	+		RR42_RS30020	0.58	-0.4
2,101,560	+		RR42_RS30020	0.61	+0.6
2,101,560	+		RR42_RS30020	0.61	+0.4
2,101,560	+		RR42_RS30020	0.61	-0.5
2,101,560	+		RR42_RS30020	0.61	-0.0
2,101,561	-		RR42_RS30020	0.62	-0.6
2,101,602	+		RR42_RS30020	0.83	+0.5
2,101,602	+		RR42_RS30020	0.83	+0.2
2,101,602	+		RR42_RS30020	0.83	+1.0
2,101,603	-		RR42_RS30020	0.84	-0.2
2,101,603	-		RR42_RS30020	0.84	-0.8
2,101,603	-		RR42_RS30020	0.84	+1.4
2,101,603	-		RR42_RS30020	0.84	+0.1
2,101,679	+				-2.0
2,101,689	+				+0.8
2,101,694	+				-0.2
2,101,706	+				+0.6
2,101,707	-				+0.8
2,101,707	-				-0.0
2,101,707	-				-2.2
2,101,707	-				-1.5
2,101,707	-				+1.9
2,101,726	+				+2.2
2,101,726	+				-1.1
2,101,726	+				+0.0
2,101,726	+				-0.6
2,101,727	-				-0.7
2,101,727	-				-1.0
2,101,727	-				+0.6
2,101,727	-				+0.5
2,101,729	-				-0.3
2,101,778	+				-0.2
2,101,778	+				+0.1
2,101,818	+				-0.1
2,101,818	+				+1.5
2,101,835	+				+0.7
2,101,835	+				-0.3
2,101,836	-				-1.1
2,101,913	+				+1.4
2,101,969	+				+0.8
2,101,969	+				+1.4
2,101,969	+				-0.3
2,101,970	-				+0.2
2,101,970	-				+0.3
2,101,970	-				-0.0
2,101,980	+				+0.2
2,101,981	-				+0.8
2,101,981	-				-0.2
2,102,034	+		RR42_RS30025	0.13	-0.4
2,102,078	+		RR42_RS30025	0.16	+0.1
2,102,079	-		RR42_RS30025	0.16	-0.5
2,102,090	-		RR42_RS30025	0.17	+0.3
2,102,090	-		RR42_RS30025	0.17	+0.1
2,102,090	-		RR42_RS30025	0.17	+1.2
2,102,237	+		RR42_RS30025	0.27	-1.3
2,102,464	+		RR42_RS30025	0.42	+0.1
2,102,480	+		RR42_RS30025	0.43	-0.4
2,102,481	-		RR42_RS30025	0.43	+0.4
2,102,608	+		RR42_RS30025	0.51	-0.3
2,102,608	+		RR42_RS30025	0.51	+1.5
2,102,608	+		RR42_RS30025	0.51	-0.3
2,102,609	-		RR42_RS30025	0.52	+0.5
2,102,609	-		RR42_RS30025	0.52	+0.7
2,102,609	-		RR42_RS30025	0.52	-2.0