Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29355

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
1,937,685	+		RR42_RS29345	0.59	-0.9
1,937,686	-		RR42_RS29345	0.59	-2.0
1,937,686	-		RR42_RS29345	0.59	-0.9
1,937,686	-		RR42_RS29345	0.59	-0.6
1,937,719	+		RR42_RS29345	0.68	-0.6
1,937,719	+		RR42_RS29345	0.68	-1.6
1,937,719	+		RR42_RS29345	0.68	-1.1
1,937,720	-		RR42_RS29345	0.69	-0.2
1,938,012	+		RR42_RS29350	0.13	-0.7
1,938,097	-		RR42_RS29350	0.25	-0.2
1,938,097	-		RR42_RS29350	0.25	+0.0
1,938,132	+		RR42_RS29350	0.30	+0.2
1,938,162	-		RR42_RS29350	0.34	+0.2
1,938,162	-		RR42_RS29350	0.34	-0.7
1,938,162	-		RR42_RS29350	0.34	+0.4
1,938,172	+		RR42_RS29350	0.36	-2.1
1,938,176	+		RR42_RS29350	0.36	+0.1
1,938,176	+		RR42_RS29350	0.36	-0.4
1,938,176	+		RR42_RS29350	0.36	+0.2
1,938,177	+		RR42_RS29350	0.36	-0.8
1,938,177	-		RR42_RS29350	0.36	+0.4
1,938,177	-		RR42_RS29350	0.36	-0.9
1,938,177	-		RR42_RS29350	0.36	-1.1
1,938,229	+		RR42_RS29350	0.43	-0.8
1,938,295	+		RR42_RS29350	0.52	-0.6
1,938,374	+		RR42_RS29350	0.63	-0.4
1,938,375	-		RR42_RS29350	0.63	+1.2
1,938,466	+		RR42_RS29350	0.76	+0.5
1,938,482	+		RR42_RS29350	0.78	-1.1
1,938,483	-		RR42_RS29350	0.78	+0.2
1,938,498	+		RR42_RS29350	0.80	+0.6
1,938,498	+		RR42_RS29350	0.80	+0.2
1,938,498	+		RR42_RS29350	0.80	-0.1
1,938,498	+		RR42_RS29350	0.80	+0.5
1,938,498	+		RR42_RS29350	0.80	-0.3
1,938,499	-		RR42_RS29350	0.81	-2.6
1,938,499	-		RR42_RS29350	0.81	-0.8
1,938,499	-		RR42_RS29350	0.81	-0.4
1,938,502	+		RR42_RS29350	0.81	-0.2
1,938,502	+		RR42_RS29350	0.81	+0.2
1,938,502	+		RR42_RS29350	0.81	+1.2
1,938,503	-		RR42_RS29350	0.81	-1.1
1,938,503	-		RR42_RS29350	0.81	+0.2
1,938,657	+				-0.4
1,938,811	+		RR42_RS29355	0.34	-0.5
1,938,847	+		RR42_RS29355	0.41	+0.4
1,938,848	-		RR42_RS29355	0.41	+0.8
1,938,893	+		RR42_RS29355	0.50	-0.2
1,938,894	-		RR42_RS29355	0.50	+3.2
1,939,028	+		RR42_RS29355	0.77	-0.1
1,939,029	-		RR42_RS29355	0.78	-0.4
1,939,030	+		RR42_RS29355	0.78	-0.7
1,939,031	-		RR42_RS29355	0.78	+0.7
1,939,046	+		RR42_RS29355	0.81	+0.0
1,939,046	+		RR42_RS29355	0.81	+0.2
1,939,046	+		RR42_RS29355	0.81	+1.2
1,939,047	-		RR42_RS29355	0.81	+0.3
1,939,047	-		RR42_RS29355	0.81	-0.4
1,939,218	+				+0.2
1,939,218	+				-0.7
1,939,218	+				-0.0
1,939,218	+				-0.2
1,939,218	+				+0.8
1,939,219	-				-0.5
1,939,219	-				-1.1
1,939,222	+				-0.1
1,939,222	+				-1.1
1,939,223	-				-0.2
1,939,579	-		RR42_RS29360	0.36	-0.3
1,939,596	+		RR42_RS29360	0.40	-0.2
1,939,604	+		RR42_RS29360	0.41	-0.6
1,939,604	+		RR42_RS29360	0.41	+0.5
1,939,768	+		RR42_RS29360	0.75	+0.0
1,939,769	-		RR42_RS29360	0.75	-1.1
1,939,769	-		RR42_RS29360	0.75	+1.2
1,939,829	+		RR42_RS29360	0.88	-0.3
1,939,830	-		RR42_RS29360	0.88	+0.2
1,939,902	-				-0.0
1,939,926	+				+0.1
1,940,009	+		RR42_RS29365	0.33	+0.0
1,940,009	+		RR42_RS29365	0.33	+0.2
1,940,010	-		RR42_RS29365	0.34	+0.5
1,940,010	-		RR42_RS29365	0.34	-0.8