Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28975

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
1,856,602	+		RR42_RS28965	0.77	-0.8
1,856,602	+		RR42_RS28965	0.77	-0.4
1,856,603	-				+2.0
1,856,603	-		RR42_RS28965	0.78	-2.3
1,856,613	-		RR42_RS28965	0.80	+0.0
1,856,621	+		RR42_RS28965	0.81	-0.4
1,856,621	+		RR42_RS28965	0.81	-2.0
1,856,622	-		RR42_RS28965	0.82	-0.5
1,856,622	-		RR42_RS28965	0.82	-0.8
1,856,656	+		RR42_RS28965	0.89	-0.9
1,856,705	+				+0.6
1,856,705	+				-0.6
1,856,705	+				-0.5
1,856,705	+				-0.1
1,856,705	+				+0.7
1,856,705	+				+0.2
1,856,705	+				-1.1
1,856,706	-				-0.4
1,856,706	-				-0.8
1,856,706	-				-0.4
1,856,879	+		RR42_RS28970	0.14	-1.2
1,857,237	+		RR42_RS28970	0.62	-1.4
1,857,238	-		RR42_RS28970	0.62	-0.1
1,857,238	-		RR42_RS28970	0.62	-0.4
1,857,238	-		RR42_RS28970	0.62	-0.4
1,857,325	-		RR42_RS28970	0.73	-1.5
1,857,348	-		RR42_RS28970	0.76	+0.1
1,857,544	+				-0.4
1,857,544	+				-0.8
1,857,544	+				-0.2
1,857,545	-				+0.4
1,857,757	+		RR42_RS28975	0.27	+0.8
1,857,757	+		RR42_RS28975	0.27	-0.5
1,857,758	-		RR42_RS28975	0.27	+0.4
1,857,758	-		RR42_RS28975	0.27	+0.2
1,857,842	+		RR42_RS28975	0.37	-0.1
1,857,857	-				+1.2
1,857,940	+		RR42_RS28975	0.50	+0.5
1,857,940	+		RR42_RS28975	0.50	+0.1
1,857,941	-		RR42_RS28975	0.50	+0.1
1,857,941	-		RR42_RS28975	0.50	-0.4
1,857,967	-		RR42_RS28975	0.53	+0.5
1,858,004	-		RR42_RS28975	0.58	-0.4
1,858,260	+		RR42_RS28975	0.90	+0.7
1,858,774	+		RR42_RS28980	0.14	+0.2
1,858,801	+		RR42_RS28980	0.16	+1.1
1,858,801	+		RR42_RS28980	0.16	+0.2
1,858,801	+		RR42_RS28980	0.16	-0.4
1,858,801	+		RR42_RS28980	0.16	+0.4
1,858,801	+		RR42_RS28980	0.16	-0.6
1,858,802	-		RR42_RS28980	0.16	-1.4
1,858,802	-		RR42_RS28980	0.16	-1.2
1,858,802	-		RR42_RS28980	0.16	+0.4
1,858,829	+		RR42_RS28980	0.17	+0.2
1,858,829	+		RR42_RS28980	0.17	+0.8
1,858,829	+		RR42_RS28980	0.17	+1.5
1,858,850	+		RR42_RS28980	0.19	-0.6
1,858,850	+		RR42_RS28980	0.19	-1.0
1,858,851	-		RR42_RS28980	0.19	-0.3
1,858,851	-		RR42_RS28980	0.19	-0.4
1,858,851	-		RR42_RS28980	0.19	-1.5
1,858,852	+		RR42_RS28980	0.19	-0.0
1,858,852	+		RR42_RS28980	0.19	-0.0
1,858,852	+		RR42_RS28980	0.19	-1.0
1,858,852	+		RR42_RS28980	0.19	+0.3
1,858,852	+		RR42_RS28980	0.19	-0.8
1,858,852	+		RR42_RS28980	0.19	-0.1
1,858,852	+		RR42_RS28980	0.19	+0.7
1,858,853	-		RR42_RS28980	0.19	-0.6
1,858,853	-		RR42_RS28980	0.19	-0.6
1,858,853	-		RR42_RS28980	0.19	-0.6
1,858,853	-		RR42_RS28980	0.19	-1.3
1,859,080	+		RR42_RS28980	0.32	-1.8
1,859,080	+		RR42_RS28980	0.32	+0.6
1,859,080	+		RR42_RS28980	0.32	+1.2
1,859,081	-		RR42_RS28980	0.32	-1.4
1,859,081	-		RR42_RS28980	0.32	+0.6