Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28285

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
1,704,655	-				+0.0
1,704,657	+				+1.6
1,704,657	+				-0.5
1,704,657	+				-1.3
1,704,672	+				+0.5
1,704,672	+				+0.5
1,704,672	+				+0.0
1,704,672	+				-0.8
1,704,673	-				+0.7
1,704,776	-		RR42_RS28280	0.16	-0.7
1,704,785	+		RR42_RS28280	0.17	-0.3
1,704,806	-		RR42_RS28280	0.19	-0.5
1,704,807	+		RR42_RS28280	0.19	+0.5
1,704,808	-		RR42_RS28280	0.20	-0.9
1,704,808	-		RR42_RS28280	0.20	-0.6
1,704,834	+		RR42_RS28280	0.22	-0.6
1,704,835	-		RR42_RS28280	0.22	-0.4
1,704,885	+		RR42_RS28280	0.27	-0.3
1,704,885	+		RR42_RS28280	0.27	-3.2
1,704,885	+		RR42_RS28280	0.27	-0.9
1,704,886	-		RR42_RS28280	0.27	-0.9
1,704,989	-		RR42_RS28280	0.38	-0.5
1,704,989	-		RR42_RS28280	0.38	-0.3
1,705,107	+		RR42_RS28280	0.49	-0.1
1,705,108	-		RR42_RS28280	0.49	+0.5
1,705,209	+		RR42_RS28280	0.59	-0.1
1,705,210	-		RR42_RS28280	0.59	+0.8
1,705,210	-		RR42_RS28280	0.59	+0.1
1,705,210	-		RR42_RS28280	0.59	+0.1
1,705,261	+		RR42_RS28280	0.64	+0.1
1,705,262	-		RR42_RS28280	0.65	+0.3
1,705,518	+				+2.3
1,705,519	-				-0.4
1,705,519	-				+0.8
1,705,560	+				-0.7
1,705,560	+				-0.6
1,705,560	+				-1.5
1,705,560	+				-0.5
1,705,561	-				-0.3
1,705,561	-				+0.4
1,705,561	-				-0.0
1,705,561	-				+0.4
1,705,653	+				-0.0
1,705,654	-				-0.3
1,705,796	+		RR42_RS28285	0.12	+2.1
1,705,797	-		RR42_RS28285	0.12	+0.6
1,705,826	+		RR42_RS28285	0.14	+0.5
1,705,826	+		RR42_RS28285	0.14	+0.7
1,705,910	+		RR42_RS28285	0.20	+0.8
1,705,910	+		RR42_RS28285	0.20	+1.6
1,705,990	+		RR42_RS28285	0.25	+0.4
1,706,520	+		RR42_RS28285	0.62	+1.0
1,706,520	+		RR42_RS28285	0.62	+0.7
1,706,520	+		RR42_RS28285	0.62	+0.1
1,706,521	-		RR42_RS28285	0.62	-1.3
1,706,521	-		RR42_RS28285	0.62	-0.3
1,706,629	-		RR42_RS28285	0.69	+0.3
1,706,629	-		RR42_RS28285	0.69	-1.8
1,706,849	+		RR42_RS28285	0.84	-0.3
1,706,918	+		RR42_RS28285	0.89	-0.1
1,706,918	+		RR42_RS28285	0.89	+0.1
1,706,918	+		RR42_RS28285	0.89	+1.3
1,706,919	-		RR42_RS28285	0.89	-0.5
1,706,931	-		RR42_RS28285	0.90	-1.9
1,706,978	+				-0.8
1,707,016	-				+1.0
1,707,164	+				-0.5
1,707,164	+				+0.6
1,707,165	-				-0.7
1,707,165	-				+0.5
1,707,168	+				-0.4
1,707,168	+				-0.5
1,707,168	+				+0.3
1,707,168	+				-0.0
1,707,169	-				+0.2
1,707,169	-				+1.6
1,707,169	-				+0.6
1,707,169	-				+0.3
1,707,169	-				+2.9
1,707,169	-				-0.2
1,707,169	-				-0.1
1,707,169	-				+0.2
1,707,173	+				-0.2
1,707,174	-				-0.1
1,707,174	-				-1.2
1,707,193	+				+0.6
1,707,194	-				-0.0
1,707,194	-				-0.5
1,707,353	+				-1.4
1,707,354	-				-0.6
1,707,360	-				+1.6
1,707,360	-				+0.3
1,707,374	-				+0.1
1,707,479	-				-1.4
1,707,575	+				-0.0
1,707,794	+		RR42_RS28290	0.38	+0.7
1,707,794	+		RR42_RS28290	0.38	+0.0
1,707,794	+		RR42_RS28290	0.38	+0.8
1,707,795	-		RR42_RS28290	0.39	-0.4
1,708,040	-		RR42_RS28290	0.80	-0.6