Experiment: R2A with Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS27285 and RR42_RS27290 are separated by 328 nucleotides RR42_RS27290 and RR42_RS27295 are separated by 617 nucleotides
RR42_RS27285: RR42_RS27285 - hypothetical protein, at 1,474,029 to 1,476,470
_RS27285
RR42_RS27290: RR42_RS27290 - hypothetical protein, at 1,476,799 to 1,477,485
_RS27290
RR42_RS27295: RR42_RS27295 - hypothetical protein, at 1,478,103 to 1,479,320
_RS27295
Position (kb)
1476
1477
1478 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1476.028 kb on + strand, within RR42_RS27285 at 1476.029 kb on - strand, within RR42_RS27285 at 1476.138 kb on - strand, within RR42_RS27285 at 1476.545 kb on - strand at 1476.588 kb on - strand at 1476.715 kb on + strand at 1476.715 kb on + strand at 1476.715 kb on + strand at 1476.715 kb on + strand at 1476.716 kb on - strand at 1476.900 kb on - strand, within RR42_RS27290 at 1477.056 kb on + strand, within RR42_RS27290 at 1477.056 kb on + strand, within RR42_RS27290 at 1477.459 kb on + strand at 1477.459 kb on + strand at 1477.459 kb on + strand at 1477.460 kb on - strand at 1477.460 kb on - strand at 1477.460 kb on - strand at 1477.462 kb on + strand at 1477.462 kb on + strand at 1477.462 kb on + strand at 1477.463 kb on - strand at 1477.463 kb on - strand at 1477.463 kb on - strand at 1477.483 kb on + strand at 1477.529 kb on + strand at 1477.529 kb on + strand at 1477.530 kb on - strand at 1477.530 kb on - strand at 1477.530 kb on - strand at 1477.544 kb on + strand at 1477.562 kb on - strand at 1477.586 kb on - strand at 1477.586 kb on - strand at 1477.586 kb on - strand at 1477.650 kb on + strand at 1477.651 kb on - strand at 1477.931 kb on - strand at 1477.933 kb on + strand at 1477.933 kb on + strand at 1477.933 kb on + strand at 1477.934 kb on - strand at 1477.934 kb on - strand at 1478.071 kb on + strand at 1478.071 kb on + strand at 1478.071 kb on + strand at 1478.072 kb on - strand at 1478.072 kb on - strand at 1478.073 kb on + strand at 1478.073 kb on + strand at 1478.074 kb on - strand at 1478.074 kb on - strand at 1478.104 kb on + strand at 1478.104 kb on + strand at 1478.104 kb on + strand at 1478.105 kb on - strand at 1478.105 kb on - strand at 1478.131 kb on - strand at 1478.200 kb on + strand at 1478.201 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Thallium(I) acetate 0.001 mg/ml remove 1,476,028 + RR42_RS27285 0.82 -0.4 1,476,029 - RR42_RS27285 0.82 -0.2 1,476,138 - RR42_RS27285 0.86 +0.4 1,476,545 - -0.6 1,476,588 - +1.2 1,476,715 + -0.1 1,476,715 + -0.4 1,476,715 + +1.1 1,476,715 + -0.6 1,476,716 - -0.5 1,476,900 - RR42_RS27290 0.15 +0.6 1,477,056 + RR42_RS27290 0.37 -1.0 1,477,056 + RR42_RS27290 0.37 +0.6 1,477,459 + +1.1 1,477,459 + -1.8 1,477,459 + +0.7 1,477,460 - -0.3 1,477,460 - -1.7 1,477,460 - -0.2 1,477,462 + -0.9 1,477,462 + +0.1 1,477,462 + +1.0 1,477,463 - +0.0 1,477,463 - -0.0 1,477,463 - -2.4 1,477,483 + +0.6 1,477,529 + -0.4 1,477,529 + +0.5 1,477,530 - -0.2 1,477,530 - -0.4 1,477,530 - +0.4 1,477,544 + -0.2 1,477,562 - +0.6 1,477,586 - +0.3 1,477,586 - -0.3 1,477,586 - -1.1 1,477,650 + +0.5 1,477,651 - -0.6 1,477,931 - -0.9 1,477,933 + -0.2 1,477,933 + -1.1 1,477,933 + +0.2 1,477,934 - +0.5 1,477,934 - +0.1 1,478,071 + -1.6 1,478,071 + +0.1 1,478,071 + -1.6 1,478,072 - +0.5 1,478,072 - -0.2 1,478,073 + +0.1 1,478,073 + -1.9 1,478,074 - +2.0 1,478,074 - -1.0 1,478,104 + -0.1 1,478,104 + +0.3 1,478,104 + -0.2 1,478,105 - -0.3 1,478,105 - -0.4 1,478,131 - -0.3 1,478,200 + +1.4 1,478,201 - -0.4
Or see this region's nucleotide sequence