Experiment: R2A with Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS26045 and RR42_RS26050 are separated by 65 nucleotides RR42_RS26050 and RR42_RS26055 are separated by 11 nucleotides RR42_RS26055 and RR42_RS26060 are separated by 82 nucleotides
RR42_RS26045: RR42_RS26045 - amino acid ABC transporter substrate-binding protein, at 1,192,363 to 1,193,256
_RS26045
RR42_RS26050: RR42_RS26050 - hypothetical protein, at 1,193,322 to 1,193,564
_RS26050
RR42_RS26055: RR42_RS26055 - esterase, at 1,193,576 to 1,194,817
_RS26055
RR42_RS26060: RR42_RS26060 - Fis family transcriptional regulator, at 1,194,900 to 1,196,258
_RS26060
Position (kb)
1193
1194
1195 Strain fitness (log2 ratio)
-1
0
1
2 at 1192.973 kb on - strand, within RR42_RS26045 at 1193.035 kb on + strand, within RR42_RS26045 at 1193.036 kb on - strand, within RR42_RS26045 at 1193.141 kb on - strand, within RR42_RS26045 at 1193.255 kb on - strand at 1193.448 kb on + strand, within RR42_RS26050 at 1193.448 kb on + strand, within RR42_RS26050 at 1193.448 kb on + strand, within RR42_RS26050 at 1193.449 kb on - strand, within RR42_RS26050 at 1193.449 kb on - strand, within RR42_RS26050 at 1193.449 kb on - strand, within RR42_RS26050 at 1193.884 kb on - strand, within RR42_RS26055 at 1193.884 kb on - strand, within RR42_RS26055 at 1193.886 kb on + strand, within RR42_RS26055 at 1193.926 kb on - strand, within RR42_RS26055 at 1193.926 kb on - strand, within RR42_RS26055 at 1193.980 kb on - strand, within RR42_RS26055 at 1193.989 kb on - strand, within RR42_RS26055 at 1193.989 kb on - strand, within RR42_RS26055 at 1194.327 kb on + strand, within RR42_RS26055 at 1194.327 kb on + strand, within RR42_RS26055 at 1194.328 kb on - strand, within RR42_RS26055 at 1194.337 kb on - strand, within RR42_RS26055 at 1194.649 kb on - strand, within RR42_RS26055 at 1194.811 kb on - strand at 1194.824 kb on + strand at 1194.844 kb on - strand at 1194.891 kb on - strand at 1195.319 kb on + strand, within RR42_RS26060 at 1195.343 kb on - strand, within RR42_RS26060 at 1195.735 kb on + strand, within RR42_RS26060 at 1195.735 kb on + strand, within RR42_RS26060 at 1195.736 kb on - strand, within RR42_RS26060 at 1195.736 kb on - strand, within RR42_RS26060
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Thallium(I) acetate 0.001 mg/ml remove 1,192,973 - RR42_RS26045 0.68 -0.4 1,193,035 + RR42_RS26045 0.75 +0.0 1,193,036 - RR42_RS26045 0.75 +1.2 1,193,141 - RR42_RS26045 0.87 -0.8 1,193,255 - -0.3 1,193,448 + RR42_RS26050 0.52 -0.3 1,193,448 + RR42_RS26050 0.52 -1.1 1,193,448 + RR42_RS26050 0.52 +1.3 1,193,449 - RR42_RS26050 0.52 -1.7 1,193,449 - RR42_RS26050 0.52 -0.4 1,193,449 - RR42_RS26050 0.52 +2.5 1,193,884 - RR42_RS26055 0.25 +0.4 1,193,884 - RR42_RS26055 0.25 +0.1 1,193,886 + RR42_RS26055 0.25 +0.5 1,193,926 - RR42_RS26055 0.28 -0.8 1,193,926 - RR42_RS26055 0.28 +1.2 1,193,980 - RR42_RS26055 0.33 +0.0 1,193,989 - RR42_RS26055 0.33 -0.7 1,193,989 - RR42_RS26055 0.33 +0.0 1,194,327 + RR42_RS26055 0.60 -0.3 1,194,327 + RR42_RS26055 0.60 +0.8 1,194,328 - RR42_RS26055 0.61 -1.4 1,194,337 - RR42_RS26055 0.61 +0.3 1,194,649 - RR42_RS26055 0.86 +0.5 1,194,811 - -1.1 1,194,824 + +0.2 1,194,844 - -0.8 1,194,891 - +0.2 1,195,319 + RR42_RS26060 0.31 +0.3 1,195,343 - RR42_RS26060 0.33 -0.4 1,195,735 + RR42_RS26060 0.61 -0.1 1,195,735 + RR42_RS26060 0.61 -1.3 1,195,736 - RR42_RS26060 0.62 -0.9 1,195,736 - RR42_RS26060 0.62 -1.2
Or see this region's nucleotide sequence