Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16725

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
3,618,370	-				-1.0
3,618,371	+				-1.0
3,618,371	-				-1.2
3,618,372	-				+0.6
3,618,372	-				-0.3
3,618,615	-				-2.0
3,619,171	-		RR42_RS16720	0.82	+0.2
3,619,174	+		RR42_RS16720	0.83	+1.7
3,619,174	+		RR42_RS16720	0.83	+0.4
3,619,174	+		RR42_RS16720	0.83	-1.8
3,619,174	+		RR42_RS16720	0.83	-1.3
3,619,175	-		RR42_RS16720	0.83	-1.3
3,619,175	-		RR42_RS16720	0.83	-0.6
3,619,175	-		RR42_RS16720	0.83	-0.9
3,619,192	-		RR42_RS16720	0.86	-1.3
3,619,192	-		RR42_RS16720	0.86	-0.3
3,619,207	-		RR42_RS16720	0.89	+0.2
3,619,617	+		RR42_RS16725	0.31	-0.5
3,619,620	+		RR42_RS16725	0.31	-1.0
3,619,620	+		RR42_RS16725	0.31	+0.3
3,619,620	+		RR42_RS16725	0.31	+0.0
3,619,621	-		RR42_RS16725	0.31	-2.0
3,619,827	+		RR42_RS16725	0.54	+0.1
3,619,827	+		RR42_RS16725	0.54	+0.8
3,619,828	-		RR42_RS16725	0.54	+0.5
3,619,890	-		RR42_RS16725	0.61	-0.3
3,619,933	-		RR42_RS16725	0.66	-0.6
3,619,947	+		RR42_RS16725	0.68	-0.6
3,619,948	-		RR42_RS16725	0.68	-0.1
3,619,948	-		RR42_RS16725	0.68	+0.0
3,619,990	-		RR42_RS16725	0.72	+0.5
3,619,990	-		RR42_RS16725	0.72	-0.2
3,620,023	-		RR42_RS16725	0.76	-0.2
3,620,136	+		RR42_RS16725	0.89	-0.1
3,620,136	+		RR42_RS16725	0.89	+0.8
3,620,137	-		RR42_RS16725	0.89	-0.1
3,620,264	-				+0.6
3,620,383	+				+1.8
3,620,384	-				-0.2
3,620,434	+		RR42_RS16730	0.14	+0.2
3,620,435	-		RR42_RS16730	0.14	-0.3
3,620,435	-		RR42_RS16730	0.14	+1.0
3,620,435	-		RR42_RS16730	0.14	-1.7
3,620,531	+		RR42_RS16730	0.23	+0.0
3,620,531	+		RR42_RS16730	0.23	+1.8
3,620,532	-		RR42_RS16730	0.23	+0.5
3,620,677	+		RR42_RS16730	0.37	+0.7
3,620,677	+		RR42_RS16730	0.37	+0.0
3,620,677	+		RR42_RS16730	0.37	-0.0
3,620,678	-		RR42_RS16730	0.37	-1.6
3,620,678	-		RR42_RS16730	0.37	+0.5
3,620,687	-		RR42_RS16730	0.38	-0.4
3,620,687	-		RR42_RS16730	0.38	-0.5
3,620,802	+		RR42_RS16730	0.49	-0.8
3,620,802	+		RR42_RS16730	0.49	-0.3
3,620,803	-		RR42_RS16730	0.49	-0.7