Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16545

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
3,583,627	+		RR42_RS16540	0.58	-0.3
3,583,773	+		RR42_RS16540	0.65	+1.9
3,584,066	+		RR42_RS16540	0.78	+0.1
3,584,291	+		RR42_RS16540	0.88	-0.9
3,584,293	+		RR42_RS16540	0.89	+0.5
3,584,371	+				-0.5
3,584,375	+				-0.9
3,584,424	-				-0.3
3,584,676	+		RR42_RS16545	0.23	+0.5
3,584,676	+		RR42_RS16545	0.23	+0.6
3,584,676	+		RR42_RS16545	0.23	-0.6
3,584,677	-		RR42_RS16545	0.23	+0.5
3,584,728	-		RR42_RS16545	0.34	+0.3
3,584,934	+		RR42_RS16545	0.78	+0.8
3,584,934	+		RR42_RS16545	0.78	+1.2
3,584,935	-		RR42_RS16545	0.78	+0.4
3,584,935	-		RR42_RS16545	0.78	+0.2
3,585,010	+				+2.3
3,585,071	+				+0.4
3,585,071	+				+1.9
3,585,072	-				+0.4
3,585,084	+				+0.5
3,585,085	-				+0.6
3,585,085	-				-1.3
3,585,086	+				-1.1
3,585,086	+				-0.6
3,585,087	-				-0.9
3,585,087	-				+0.3
3,585,119	-				+0.3
3,585,119	-				-1.0
3,585,157	+				-0.1
3,585,266	+				+1.3
3,585,267	-				+0.4
3,585,267	-				+2.4
3,585,269	+				+0.3
3,585,270	-				-1.0
3,585,282	-				-0.1
3,585,297	+				+0.6
3,585,400	+				-0.5
3,585,452	+				-0.7
3,585,452	+				-0.6
3,585,456	+				+0.1
3,585,456	+				-0.6
3,585,559	-		RR42_RS16550	0.11	-0.5
3,585,559	-		RR42_RS16550	0.11	+0.1
3,585,603	+		RR42_RS16550	0.13	-0.9
3,585,604	-		RR42_RS16550	0.13	-0.7
3,585,604	-		RR42_RS16550	0.13	-0.8
3,585,858	+		RR42_RS16550	0.25	-0.7
3,585,858	+		RR42_RS16550	0.25	+0.9
3,585,858	+		RR42_RS16550	0.25	+1.9
3,585,859	-		RR42_RS16550	0.25	+0.0
3,585,859	-		RR42_RS16550	0.25	+0.7
3,585,859	-		RR42_RS16550	0.25	+0.4
3,585,901	-		RR42_RS16550	0.26	+0.2
3,585,987	+		RR42_RS16550	0.30	+0.4