Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15225
Experiment: R2A with Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Thallium(I) acetate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,298,685 | - | +0.2 | |||
3,298,685 | - | +2.2 | |||
3,298,726 | + | RR42_RS15225 | 0.16 | +0.3 | |
3,299,265 | + | RR42_RS15230 | 0.72 | +0.1 | |
3,299,266 | - | RR42_RS15230 | 0.72 | -0.8 | |
3,299,266 | - | RR42_RS15230 | 0.72 | +1.2 | |
3,299,277 | + | RR42_RS15230 | 0.75 | +0.3 | |
3,299,277 | + | RR42_RS15230 | 0.75 | +0.2 | |
3,299,343 | - | -0.9 | |||
3,299,343 | - | +0.1 | |||
3,299,498 | + | RR42_RS15235 | 0.19 | -0.4 | |
3,299,498 | + | RR42_RS15235 | 0.19 | -0.7 | |
3,299,499 | - | RR42_RS15235 | 0.19 | +0.2 | |
3,299,499 | - | RR42_RS15235 | 0.19 | +1.2 | |
3,299,499 | - | RR42_RS15235 | 0.19 | +0.9 |
Or see this region's nucleotide sequence