Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13965

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
3,007,338	+		RR42_RS13960	0.43	-0.3
3,007,338	+		RR42_RS13960	0.43	-0.2
3,007,401	+		RR42_RS13960	0.49	-1.3
3,007,407	+		RR42_RS13960	0.49	+0.1
3,007,407	+		RR42_RS13960	0.49	-0.1
3,007,408	-		RR42_RS13960	0.49	-0.6
3,007,408	-		RR42_RS13960	0.49	-0.5
3,007,408	-		RR42_RS13960	0.49	-1.7
3,007,436	+		RR42_RS13960	0.52	-0.2
3,007,436	+		RR42_RS13960	0.52	-1.0
3,007,436	+		RR42_RS13960	0.52	-0.5
3,007,437	-		RR42_RS13960	0.52	+0.3
3,007,520	+		RR42_RS13960	0.60	+0.0
3,007,520	+		RR42_RS13960	0.60	-1.6
3,007,521	-		RR42_RS13960	0.60	+0.5
3,007,521	-		RR42_RS13960	0.60	-0.5
3,007,563	-		RR42_RS13960	0.63	+0.7
3,007,687	-		RR42_RS13960	0.75	+0.6
3,007,687	-		RR42_RS13960	0.75	-0.3
3,007,687	-		RR42_RS13960	0.75	+2.7
3,007,687	-		RR42_RS13960	0.75	-0.2
3,007,771	+		RR42_RS13960	0.82	-1.0
3,007,771	+		RR42_RS13960	0.82	+0.1
3,007,771	+		RR42_RS13960	0.82	+0.7
3,007,771	+		RR42_RS13960	0.82	-0.5
3,007,771	+		RR42_RS13960	0.82	-0.6
3,008,009	+				+0.3
3,008,009	+				-0.4
3,008,010	-				-2.0
3,008,010	-				+0.7
3,008,016	+				-0.6
3,008,029	+				+0.7
3,008,029	+				-0.5
3,008,029	+				-1.1
3,008,030	-				-1.4
3,008,030	-				-1.5
3,008,033	+				-1.5
3,008,033	+				+1.1
3,008,033	+				+0.5
3,008,033	+				+0.7
3,008,033	+				-0.3
3,008,033	+				-0.9
3,008,033	+				-0.6
3,008,033	+				-0.0
3,008,033	+				+0.4
3,008,034	-				-1.8
3,008,034	-				-0.6
3,008,034	-				+3.0
3,008,034	-				+0.7
3,008,034	-				+0.2
3,008,034	-				-0.5
3,008,034	-				+0.5
3,008,034	-				-0.5
3,008,043	-				+2.7
3,008,070	+				+0.5
3,008,399	+		RR42_RS13965	0.34	+0.8
3,008,409	+		RR42_RS13965	0.35	+0.5
3,008,409	+		RR42_RS13965	0.35	+1.2
3,008,409	+		RR42_RS13965	0.35	+0.5
3,008,409	+		RR42_RS13965	0.35	-0.9
3,008,409	+		RR42_RS13965	0.35	-0.6
3,008,409	+		RR42_RS13965	0.35	-1.1
3,008,409	+		RR42_RS13965	0.35	-0.3
3,008,409	+		RR42_RS13965	0.35	+0.1
3,008,411	+		RR42_RS13965	0.35	-1.0
3,008,411	+		RR42_RS13965	0.35	-0.5
3,008,411	+		RR42_RS13965	0.35	-0.9
3,008,634	+		RR42_RS13965	0.60	-0.6
3,008,929	-				-0.7
3,008,929	-				-0.2
3,008,929	-				-0.0
3,008,934	-				+0.7
3,008,934	-				-0.3
3,008,934	-				-0.1
3,008,962	-				-0.4
3,009,099	+				+0.5
3,009,166	+		RR42_RS13970	0.11	+1.1
3,009,509	-		RR42_RS13970	0.39	-0.3
3,009,605	+		RR42_RS13970	0.46	+0.3
3,009,605	+		RR42_RS13970	0.46	+1.4
3,009,662	+		RR42_RS13970	0.51	-0.9
3,009,870	+		RR42_RS13970	0.68	+0.9
3,009,982	-		RR42_RS13970	0.77	-0.1
3,009,982	-		RR42_RS13970	0.77	-0.5