Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13420

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
2,893,708	+				+0.5
2,893,960	+				+0.6
2,894,373	+				-0.0
2,894,373	+				-0.6
2,894,373	+				-1.4
2,894,478	+				-0.7
2,894,478	+				-0.2
2,894,478	+				+0.4
2,894,479	-				-0.7
2,894,479	-				+0.0
2,894,479	-				+1.3
2,894,479	-				+0.9
2,894,479	-				+0.1
2,894,479	-				+1.0
2,894,479	-				-0.3
2,894,479	-				-0.9
2,894,570	-				-1.7
2,894,578	+				+0.5
2,894,579	-				+0.5
2,894,579	-				+1.7
2,894,579	-				+0.4
2,894,579	-				-0.5
2,894,616	-				-0.6
2,894,740	+		RR42_RS13420	0.22	+0.9
2,894,740	+		RR42_RS13420	0.22	-1.6
2,894,740	+		RR42_RS13420	0.22	-0.6
2,894,741	-		RR42_RS13420	0.22	-1.1
2,894,741	-		RR42_RS13420	0.22	-0.1
2,894,741	-		RR42_RS13420	0.22	-0.7
2,895,208	+				+1.0
2,895,208	+				-0.5
2,895,208	+				-1.3
2,895,209	-				+0.1
2,895,209	-				+1.9
2,895,245	+				+0.2
2,895,246	-				+1.1
2,895,419	+				+0.1
2,895,420	-				-0.1
2,895,443	-				-1.2
2,895,443	-				-0.1
2,895,443	-				+0.1
2,895,507	+		RR42_RS13425	0.16	-0.4
2,895,507	+		RR42_RS13425	0.16	-0.9
2,895,507	+		RR42_RS13425	0.16	+0.7
2,895,508	-		RR42_RS13425	0.16	-1.8
2,895,508	-		RR42_RS13425	0.16	-1.0
2,895,521	-		RR42_RS13425	0.18	-1.1
2,895,620	-		RR42_RS13425	0.32	+0.1
2,895,707	-		RR42_RS13425	0.44	+4.5
2,895,754	+		RR42_RS13425	0.51	-0.5
2,895,878	-		RR42_RS13425	0.68	+1.3