Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12505

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
2,688,414	+				-0.0
2,688,415	-				-0.5
2,688,415	-				-0.6
2,688,626	-				+0.4
2,688,626	-				-0.3
2,688,626	-				-0.7
2,688,991	+		RR42_RS12500	0.47	-0.5
2,688,991	+		RR42_RS12500	0.47	-0.7
2,688,991	+		RR42_RS12500	0.47	+0.3
2,688,992	-		RR42_RS12500	0.47	-0.6
2,688,992	-		RR42_RS12500	0.47	-1.7
2,688,994	+		RR42_RS12500	0.47	-0.3
2,688,994	+		RR42_RS12500	0.47	-0.0
2,688,995	-		RR42_RS12500	0.48	-0.0
2,689,441	+				-1.0
2,689,486	-		RR42_RS12505	0.14	-0.2
2,689,591	+		RR42_RS12505	0.32	+0.7
2,689,594	-		RR42_RS12505	0.32	-0.5
2,689,617	+		RR42_RS12505	0.36	-0.5
2,689,618	-		RR42_RS12505	0.36	-0.3
2,689,626	+		RR42_RS12505	0.37	-0.4
2,689,627	-		RR42_RS12505	0.37	-0.5
2,689,627	-		RR42_RS12505	0.37	+0.0
2,689,630	+		RR42_RS12505	0.38	-1.0
2,689,630	+		RR42_RS12505	0.38	+1.6
2,689,630	+		RR42_RS12505	0.38	+1.0
2,689,833	+		RR42_RS12505	0.71	-0.6
2,689,834	-		RR42_RS12505	0.72	+0.1
2,689,839	+		RR42_RS12505	0.72	-0.0
2,689,839	+		RR42_RS12505	0.72	+0.4
2,689,839	+		RR42_RS12505	0.72	-0.9
2,689,839	+		RR42_RS12505	0.72	-2.0
2,689,840	-		RR42_RS12505	0.73	-0.1
2,689,840	-		RR42_RS12505	0.73	+1.0
2,689,896	+		RR42_RS12505	0.82	-0.3
2,689,896	+		RR42_RS12505	0.82	-0.4
2,689,896	+		RR42_RS12505	0.82	+1.4
2,689,897	-		RR42_RS12505	0.82	-0.3
2,689,899	+		RR42_RS12505	0.82	-0.1
2,689,899	+		RR42_RS12505	0.82	-0.8
2,690,142	-				-0.5
2,690,149	+				-0.3
2,690,149	+				-1.0
2,690,149	+				+0.2
2,690,149	+				+0.4
2,690,150	-				+0.1
2,690,150	-				+1.6
2,690,150	-				+0.9
2,690,150	-				-1.2
2,690,150	-				+0.0
2,690,150	-				+0.5
2,690,150	-				+0.0
2,690,536	+		RR42_RS12510	0.35	-1.2
2,690,536	+		RR42_RS12510	0.35	-0.4
2,690,536	+		RR42_RS12510	0.35	+0.3
2,690,536	+		RR42_RS12510	0.35	-1.6
2,690,537	-		RR42_RS12510	0.36	-1.4
2,690,679	+		RR42_RS12510	0.53	-0.2
2,690,680	-		RR42_RS12510	0.53	-0.7
2,690,944	-		RR42_RS12510	0.84	-0.3