Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12350

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
2,649,257	+				-0.4
2,649,258	-				-0.3
2,649,698	-		RR42_RS12345	0.25	+0.3
2,649,876	+		RR42_RS12345	0.58	-0.0
2,650,104	+				+0.6
2,650,156	+				+2.0
2,650,208	+				-2.7
2,650,208	+				-1.6
2,650,210	+				+0.6
2,650,210	+				-1.0
2,650,210	+				-0.1
2,650,299	-		RR42_RS12350	0.13	-0.4
2,650,316	+		RR42_RS12350	0.18	+1.6
2,650,316	+		RR42_RS12350	0.18	-0.9
2,650,316	+		RR42_RS12350	0.18	+0.4
2,650,317	-		RR42_RS12350	0.19	+0.5
2,650,317	-		RR42_RS12350	0.19	+0.4
2,650,317	-		RR42_RS12350	0.19	+0.6
2,650,317	-		RR42_RS12350	0.19	+0.6
2,650,317	-		RR42_RS12350	0.19	+0.3
2,650,317	-		RR42_RS12350	0.19	-0.7
2,650,757	-		RR42_RS12355	0.17	+0.5
2,650,769	+		RR42_RS12355	0.18	-0.0
2,650,818	+		RR42_RS12355	0.23	+0.1
2,650,819	-		RR42_RS12355	0.24	+0.8
2,650,830	-		RR42_RS12355	0.25	+3.2
2,650,897	+		RR42_RS12355	0.32	-0.0
2,650,898	-		RR42_RS12355	0.32	+0.3
2,650,898	-		RR42_RS12355	0.32	+0.1
2,651,076	-		RR42_RS12355	0.52	-0.5
2,651,076	-		RR42_RS12355	0.52	+0.4
2,651,205	+		RR42_RS12355	0.66	+0.4
2,651,206	-		RR42_RS12355	0.66	-0.2
2,651,221	+		RR42_RS12355	0.68	+0.2
2,651,347	+		RR42_RS12355	0.82	+0.3
2,651,347	+		RR42_RS12355	0.82	-0.0
2,651,347	+		RR42_RS12355	0.82	-0.2
2,651,347	+		RR42_RS12355	0.82	+0.1
2,651,348	-		RR42_RS12355	0.82	-0.0
2,651,349	+		RR42_RS12355	0.82	+0.9
2,651,349	+		RR42_RS12355	0.82	+0.1
2,651,415	+		RR42_RS12355	0.90	-1.6
2,651,541	+				+0.6
2,651,542	-				+1.1
2,651,543	+				-1.3
2,651,544	-				+0.2
2,651,570	+				-0.6
2,651,579	-				+0.1
2,651,587	+				+1.3