Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11570
Experiment: R2A with Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Thallium(I) acetate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,477,372 | + | RR42_RS11565 | 0.86 | +0.0 | |
2,477,450 | + | RR42_RS11565 | 0.89 | -0.5 | |
2,477,450 | + | RR42_RS11565 | 0.89 | +1.3 | |
2,477,451 | - | RR42_RS11565 | 0.89 | +0.0 | |
2,477,451 | - | RR42_RS11565 | 0.89 | -1.1 | |
2,477,532 | + | -1.1 | |||
2,477,533 | - | +1.8 | |||
2,477,695 | + | +0.1 | |||
2,477,695 | + | -0.0 | |||
2,477,695 | + | -1.7 | |||
2,477,695 | + | -0.7 | |||
2,477,696 | - | +2.0 | |||
2,477,696 | - | -0.2 | |||
2,477,707 | + | +0.1 | |||
2,477,752 | - | -0.2 | |||
2,478,000 | - | -0.0 | |||
2,478,000 | - | +0.3 | |||
2,478,012 | + | +0.4 | |||
2,478,013 | - | -0.3 | |||
2,478,250 | + | -0.2 | |||
2,478,625 | + | +1.1 | |||
2,478,694 | + | +0.5 | |||
2,478,883 | + | +0.3 | |||
2,478,883 | + | +0.4 | |||
2,478,883 | + | -0.2 | |||
2,478,884 | - | -0.4 | |||
2,478,884 | - | +3.8 | |||
2,478,884 | - | +1.7 | |||
2,478,884 | - | -0.5 | |||
2,478,886 | - | -1.5 | |||
2,478,912 | + | -0.3 | |||
2,479,177 | + | -0.3 | |||
2,479,338 | + | RR42_RS11580 | 0.11 | -0.0 |
Or see this region's nucleotide sequence