Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11345

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
2,427,337	-		RR42_RS11340	0.47	-0.1
2,427,408	+		RR42_RS11340	0.52	+1.0
2,427,408	+		RR42_RS11340	0.52	+0.5
2,427,408	+		RR42_RS11340	0.52	-0.9
2,427,409	-		RR42_RS11340	0.52	-1.1
2,427,600	+		RR42_RS11340	0.63	+0.3
2,427,601	-		RR42_RS11340	0.63	-0.6
2,427,640	-		RR42_RS11340	0.66	+0.4
2,427,723	+		RR42_RS11340	0.71	-0.5
2,427,888	+		RR42_RS11340	0.81	+0.1
2,427,888	+		RR42_RS11340	0.81	+1.1
2,427,888	+		RR42_RS11340	0.81	-0.2
2,427,889	-		RR42_RS11340	0.81	-0.7
2,427,960	+		RR42_RS11340	0.85	+0.3
2,427,960	+		RR42_RS11340	0.85	-0.3
2,427,978	+		RR42_RS11340	0.86	-0.5
2,427,978	+		RR42_RS11340	0.86	+1.1
2,427,982	+		RR42_RS11340	0.87	-0.1
2,427,982	+		RR42_RS11340	0.87	+0.5
2,427,982	+		RR42_RS11340	0.87	-0.4
2,427,983	-		RR42_RS11340	0.87	-0.4
2,428,196	+				-1.5
2,428,196	+				-1.1
2,428,197	-				+0.3
2,428,256	+				+0.2
2,428,296	+				-1.6
2,428,296	+				-1.5
2,428,337	+				+1.5
2,428,337	+				+0.6
2,428,423	-				+0.5
2,428,442	+				-0.4
2,428,442	+				-0.1
2,428,443	-				-0.3
2,428,443	-				-0.1
2,428,509	-		RR42_RS11345	0.15	-2.4
2,428,998	+		RR42_RS11345	0.58	-0.5
2,428,999	-		RR42_RS11345	0.58	-0.8
2,429,027	+		RR42_RS11345	0.61	-0.7
2,429,028	-		RR42_RS11345	0.61	+0.2
2,429,156	+		RR42_RS11345	0.72	-2.3
2,429,156	+		RR42_RS11345	0.72	-0.4
2,429,156	+		RR42_RS11345	0.72	+1.5
2,429,181	-		RR42_RS11345	0.74	-2.4
2,429,181	-		RR42_RS11345	0.74	+0.9
2,429,181	-		RR42_RS11345	0.74	-0.2
2,429,264	+		RR42_RS11345	0.82	-1.3
2,429,264	+		RR42_RS11345	0.82	-2.1
2,429,292	-		RR42_RS11345	0.84	+0.4
2,429,360	+				+0.1
2,429,452	-				-0.9
2,429,452	-				+0.2
2,429,455	+				-0.5
2,429,456	-				+1.5
2,429,456	-				-0.7
2,429,468	-				+1.3
2,429,711	+				-0.3
2,429,712	-				+0.2
2,429,807	+		RR42_RS11350	0.19	+0.3
2,429,807	+		RR42_RS11350	0.19	-0.4
2,429,855	+		RR42_RS11350	0.25	-0.3
2,429,915	+		RR42_RS11350	0.32	-1.2
2,429,916	-		RR42_RS11350	0.32	-0.1
2,429,916	-		RR42_RS11350	0.32	+0.2
2,429,916	-		RR42_RS11350	0.32	-0.0
2,430,037	-		RR42_RS11350	0.45	+1.0
2,430,109	-		RR42_RS11350	0.54	-0.4
2,430,109	-		RR42_RS11350	0.54	-1.5
2,430,404	+		RR42_RS11350	0.87	-2.8
2,430,405	-		RR42_RS11350	0.87	+0.4
2,430,405	-		RR42_RS11350	0.87	+0.2